Protein Model on 5kar_A_1_G_1 (TEMPLATE: 5kar )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(ASM_HUMAN) A 1 (A) polymer(polypeptide(L)) [412 aa] Acid sphingomyelinase-like phosphodiesterase 3b :ASM3B_MOUSE
2 b G 1 (A) non-polymer(NO3) NITRATE ION 539Y 544T(A) 571T(R) 576Y (identity: 50.0 %/33.2 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:5kar_A_1 identity=33.2%
queryA       200:VSRILFLTDLHWDHDYLEGTDPDCADPLCCRRGSGLPPASRPGAGYWGEYSKCDLPLRTLESLLSGLGPAGPF-DMVYWTGDIPAHDVWHQTRQDQLRAL: 298
                :  *     *** *  *    **    *       *  *     ** ** *  ** *     * *       *  *   ****   *            * :
5kar_A_1      12:LGRFWHISDLHLDPNYTVSKDPLQVCP-----SAGSQPVL--NAGPWGDY-LCDSPWALINSSLYAMKEIEPKPDFILWTGDDTPHVPNESLGEAAVLAI: 103
SecStr          : EEEEEE    B TT    SSTTSS G-----GGTTS   --S BTTB T-TS B HHHHHHHHHHHHHH SS SEEEE    S SS GGGS HHHHHHH:    
ExpBur          :ebebbbbbbbbbbeebeeeeeeeebbe-----bbeeeebe--ebbebbbb-ebbbbbebbebbbebbeeebeebbbbbbbbbbbbbbeeeebebeebbeb:    

queryA       299:TT-VTALVRKFLGPVPVYPAVGNHESTPVNSFPPPFIEGNHSSRWLYEAMAKAWEPWLPAEALRTLRIGGFYALS---PYPGLRLISLNMNFCSRENFWL: 394
                :    * *         ** * ***   * * **         *   *   *  * ***  *       * **      *    *   ** *     *   :
5kar_A_1     104:VERLTNLIKEVFPDTKVYAALGNHDFHPKNQFPA-------QSNRIYNQVAELWRPWLSNESYALFKRGAFYSEKLPGPSRAGRVVVLNTNLYYSNN-EQ: 195
SecStr          :HHHHHHHHHHHSTT  EEE   TTSSSSTT   S-------S  HHHHHHHHHHGGGS HHHHHHHHHHS EEEE  TTSSSEEEEE  GGGGBTT -GG:    
ExpBur          :beebbebbeebbeebebbbbbbbbbbeeebbbbe-------eebebbeebbebbeebbeeebbebbeebbbbbbebeeebebbbbbbbbbbbbbeeb-ee:    

queryA       395:LINSTDPAGQLQWLVGELQAAEDRGDKVHIIGHIPPGHCLK---------SWSWNYYRIVARYENTLAAQFFGHTHVDEFEVFYDEETLSRPLAVAFLAP: 485
                :     **  *  **   *  *   *  *  *** ***   *         *    *           * ***** * * *  ***      *  * ** *:
5kar_A_1     196:TAGMADPGEQFRWLGDVLSNASRDGEMVYVIGHVPPGFFEKTQNKAWFRESFNEEYLKVIQKHHRVIAGQFFGHHHTDSFRMFYD--NTGAPINVMFLTP: 293
SecStr          :GTT SSGGGHHHHHHHHHHHHHHHT EEEEE SS SSB TTSSS BSB HHHHHHHHHHHHHHGGGEEEEEE SS S EEEEEE --TTS EEEEEEE  :    
ExpBur          :beeeeebeebbebbbebbeebeeeebebbbbbbbbbbbbbbbeeebbbeeebbeebbebbeebbebbbbbbbbbbbbbbbbbbbb--eeeeebbbbbbbb:    

queryA       486:SA----TTYIGL-----NPGYRVYQIDGNYSGSSHVVLDHETYILNLTQANIPGAIPHWQLLYRARETYGLPNTLPTAWHNLVYRMRGDMQLFQTFWFLY: 576
                :      **  *      *** *       *        *  ** *** ***     * *   **  * *  *       *    *        *     *:
5kar_A_1     294:GVTPWKTTLPGVVDGANNPGIRIFE----YDRATLNLKDLVTYFLNLRQANVQ-ETPRWEQEYRLTEAYQVPDASVSSMHTALTRIASEPHILQRY-YVY: 387
SecStr          : S       TT SS     EEEEEE----E TTT  EEEEEEEE  HHHHTTS-SS   EEEEEHHHHHT SSSSHHHHHHHHHHHHH HHHHHHH-HHH:    
ExpBur          :bbbbbeeeeeebeebbbbbbbbbbb----beeeebebebbbbbbbebeebeee-eebebeebbebeebbebeebeeebbeebbebbbeeeebbbeb-bbb:    
Contact         :                                                              b    b                          b    b

queryA       577:HKGHPPSEPCGTPCRLATLCAQLSARADSPALCRH: 611
                :         *   **    **         * * *:
5kar_A_1     388:NSVSYNHLTCEDSCRIEHVCAIQHVAFNTYATCLH: 422
SecStr          :HTTTS  S   HHHHHHHHHHHH  SHHHHHHHHT:    
ExpBur          :bbbbbbeeebeeebeebbbbbbeebbeeebeebbe:

Input Residue Numbers for Focused Sites

ex) 2,15,123