[pdbjlvh2]Protein Model on 5jg8_B_1_G

Protein Model on 5jg8_B_1_G_1 (TEMPLATE: 5jg8 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(ASM_HUMAN)	B 1 (B)	polymer(polypeptide(L)) [530 aa]	Sphingomyelin phosphodiesterase :ASM_HUMAN
2	b		G 1 (G)	branched(oligosaccharide)	alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose	139L 289Q 290T 291R 337N (identity: 100.0 %/100.0 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:5jg8_B_1 identity=100.0%

queryA        84:FGWGNLTCPICKGLFTAINLGLKKEPNVARVGSVAIKLCNLLKIAPPAVCQSIVHLFEDDMVEVWRRSVLSPSEACGLLLGSTCGHWDIFSSWNISLPTV: 183
                :****************************************************************************************************:
5jg8_B_1      39:FGWGNLTCPICKGLFTAINLGLKKEPNVARVGSVAIKLCNLLKIAPPAVCQSIVHLFEDDMVEVWRRSVLSPSEACGLLLGSTCGHWDIFSSWNISLPTV: 138
SecStr          :  GGGTHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHH  S HHHHHHHHHHHHHHHHHHHHHTTSSTTTHHHHHTBTTB    TT        SS:    
ExpBur          :eeeeeeeeeebeeebeeebeebeeeeebeeebeeebeeeeeeeebeeebbeeebeebbebebebebebbeeebbbbbeeebeebbeeebeeebebeeeee:    
Contact         :                                                       b                                            

queryA       184:PKPPPKPPSPPAPGAPVSRILFLTDLHWDHDYLEGTDPDCADPLCCRRGSGLPPASRPGAGYWGEYSKCDLPLRTLESLLSGLGPAGPFDMVYWTGDIPA: 283
                :****************************************************************************************************:
5jg8_B_1     139:PKPPPKPPSPPAPGAPVSRILFLTDLHWDHDYLEGTDPDCADPLCCRRGSGLPPASRPGAGYWGEYSKCDLPLRTLESLLSGLGPAGPFDMVYWTGDIPA: 238
SecStr          :            TT  EEEEEEE    B S B TTS SS SSSS SBTTS    TT     TT  SSS  B HHHHHHHHHTTSSS   SEEEE    B :    
ExpBur          :eeeeeeeeeeeeeeeeebbbbbbbbbbbbeebeeebbbebeeebbbbeebeeeeeeeeebbebbbbeebbbbeebbebbbeebeeebebebbbbbbbbbb:    

queryA       284:HDVWHQTRQDQLRALTTVTALVRKFLGPVPVYPAVGNHESTPVNSFPPPFIEGNHSSRWLYEAMAKAWEPWLPAEALRTLRIGGFYALSPYPGLRLISLN: 383
                :****************************************************************************************************:
5jg8_B_1     239:HDVWHQTRQDQLRALTTVTALVRKFLGPVPVYPAVGNHESTPVNSFPPPFIEGNHSSRWLYEAMAKAWEPWLPAEALRTLRIGGFYALSPYPGLRLISLN: 338
SecStr          :S  SS  HHHHHHHHHHHHHHHHHHHTTS EEE   SSSSSSTT    TTS SSSSSHHHHHHTTTSSTTTS HHHHHHHHHTS EEE SSTTEEEEE  :    
ExpBur          :bbbbebeeeebeebbeebbebbeeebeeeebbbbbbbbbbbbbbbbbbeebeeeebbebbbebbbebbeebbeeebbebbeebbbbbbebbeebbbbbbb:    
Contact         :     bbb                                             b                                              

queryA       384:MNFCSRENFWLLINSTDPAGQLQWLVGELQAAEDRGDKVHIIGHIPPGHCLKSWSWNYYRIVARYENTLAAQFFGHTHVDEFEVFYDEETLSRPLAVAFL: 483
                :****************************************************************************************************:
5jg8_B_1     339:MNFCSRENFWLLINSTDPAGQLQWLVGELQAAEDRGDKVHIIGHIPPGHCLKSWSWNYYRIVARYENTLAAQFFGHTHVDEFEVFYDEETLSRPLAVAFL: 438
SecStr          :GGGG SS GGGGT  SSGGGHHHHHHHHHHHHHHHT EEEEEESS TTSS SHHHHHHHHHHHHTTTTEEEEEEEEEES EEEEEE TTTS SEEEEEEE:    
ExpBur          :bbbbbeebbbbbbebebbeebbeebbebbbebbeeebebbbbbbbbbeebbebbbebbbebbbbbbebbbbbbbbbbbbbbbbbbbbeeebeebbbbbbb:    

queryA       484:APSATTYIGLNPGYRVYQIDGNYSGSSHVVLDHETYILNLTQANIPGAIPHWQLLYRARETYGLPNTLPTAWHNLVYRMRGDMQLFQTFWFLYHKGHPPS: 583
                :****************************************************************************************************:
5jg8_B_1     439:APSATTYIGLNPGYRVYQIDGNYSGSSHVVLDHETYILNLTQANIPGAIPHWQLLYRARETYGLPNTLPTAWHNLVYRMRGDMQLFQTFWFLYHKGHPPS: 538
SecStr          :EE SS TTT   EEEEEEEE SSTT    EEEEEEEEE HHHHTSTT    EE   BHHHHHT S SSHHHHHHHHHHHHH HHHHHHHHHHHTTT   S:    
ExpBur          :bbbbbbeeebbbbbbbbbbbbeeeebbbbbbbbbbbbbebeebeeeeeeeebeeebebeeebebeebebebbbebbeebeeeeebbeebbebbbbeeeee:    

queryA       584:EPCGTPCRLATLCAQLSARADSPALCRHLM: 613
                :******************************:
5jg8_B_1     539:EPCGTPCRLATLCAQLSARADSPALCRHLM: 568
SecStr          :S   HHHHHHHHHHHH  STT GGGGGGG :    
ExpBur          :eebeeeebeebbeebbbbbbebeebbeebe:

Protein Model on 5jg8_B_1_G_1 (TEMPLATE: 5jg8 )

Input Residue Numbers for Focused Sites