[pdbjlvh2]Protein Model on 5jg8_A_1_N

Protein Model on 5jg8_A_1_N_1 (TEMPLATE: 5jg8 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(ASM_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [529 aa]	Sphingomyelin phosphodiesterase :ASM_HUMAN
2	b		N 1 (A)	non-polymer(NAG)	2-acetamido-2-deoxy-beta-D-glucopyranose	175S 176W 177N 435K 436S (identity: 100.0 %/100.0 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:5jg8_A_1 identity=100.0%

queryA        85:GWGNLTCPICKGLFTAINLGLKKEPNVARVGSVAIKLCNLLKIAPPAVCQSIVHLFEDDMVEVWRRSVLSPSEACGLLLGSTCGHWDIFSSWNISLPTVP: 184
                :****************************************************************************************************:
5jg8_A_1      40:GWGNLTCPICKGLFTAINLGLKKEPNVARVGSVAIKLCNLLKIAPPAVCQSIVHLFEDDMVEVWRRSVLSPSEACGLLLGSTCGHWDIFSSWNISLPTVP: 139
SecStr          : GGGTHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHH SS HHHHHHHHHHHHHHHHHHHHHTTSSTTTHHHHHTBTTB    TT        SS :    
ExpBur          :eeeeeeeeebeeebeeebeebeeeeebeeebeeebeeeeeeeebeeebbeebbeeebebebebebebbebeebbbbeeebeebeeeebeeebebeeeeee:    
Contact         :                                                                                          bbb       

queryA       185:KPPPKPPSPPAPGAPVSRILFLTDLHWDHDYLEGTDPDCADPLCCRRGSGLPPASRPGAGYWGEYSKCDLPLRTLESLLSGLGPAGPFDMVYWTGDIPAH: 284
                :****************************************************************************************************:
5jg8_A_1     140:KPPPKPPSPPAPGAPVSRILFLTDLHWDHDYLEGTDPDCADPLCCRRGSGLPPASRPGAGYWGEYSKCDLPLRTLESLLSGLGPAGPFDMVYWTGDIPAH: 239
SecStr          :           TT  EEEEEEE    B S B TTS SS SSSS SBTTS    TTS    TT  SSS  B HHHHHHHHHTTTTS   SEEEE    B S:    
ExpBur          :eeeeeeeeeeeeeeeebebbbbbbbbbbebbeeebbbebeeebbbbeebeeeeeeeeebbebbbbeebbbbeebbebbbeebeeebebebbbbbbbbbbb:    

queryA       285:DVWHQTRQDQLRALTTVTALVRKFLGPVPVYPAVGNHESTPVNSFPPPFIEGNHSSRWLYEAMAKAWEPWLPAEALRTLRIGGFYALSPYPGLRLISLNM: 384
                :****************************************************************************************************:
5jg8_A_1     240:DVWHQTRQDQLRALTTVTALVRKFLGPVPVYPAVGNHESTPVNSFPPPFIEGNHSSRWLYEAMAKAWEPWLPAEALRTLRIGGFYALSPYPGLRLISLNM: 339
SecStr          :  SS  HHHHHHHHHHHHHHHHHHHTTS EEE   SSSSSSTT    TTS SSSSSHHHHHHTTTSSTTTS HHHHHHHHHTS EEE SSTTEEEEE  G:    
ExpBur          :bbbebeeeebeebbeebbebbeeebeeeebbbbbbbbbbbbbbbbbbeebeeeebbebbbebbbebbeebbeeebbebbeebbbbbbebbeebbbbbbbb:    

queryA       385:NFCSRENFWLLINSTDPAGQLQWLVGELQAAEDRGDKVHIIGHIPPGHCLKSWSWNYYRIVARYENTLAAQFFGHTHVDEFEVFYDEETLSRPLAVAFLA: 484
                :****************************************************************************************************:
5jg8_A_1     340:NFCSRENFWLLINSTDPAGQLQWLVGELQAAEDRGDKVHIIGHIPPGHCLKSWSWNYYRIVARYENTLAAQFFGHTHVDEFEVFYDEETLSRPLAVAFLA: 439
SecStr          :GGG SS GGGGT  SSGGGHHHHHHHHHHHHHGGG EEEEEESS TTSS SHHHHHHHHHHHHTTTTEEEEEEEEEES EEEEEE TTTS SEEEEEEEE:    
ExpBur          :bbbbeebbbbbbebebbeebbeebbebbbebbeeebebbbbbbbbbeebbebbbebbbebbbbbbebbbbbbbbebbbbbbbbbbbeeebeebbbbbbbb:    
Contact         :                                                  bb                                                

queryA       485:PSATTYIGLNPGYRVYQIDGNYSGSSHVVLDHETYILNLTQANIPGAIPHWQLLYRARETYGLPNTLPTAWHNLVYRMRGDMQLFQTFWFLYHKGHPPSE: 584
                :****************************************************************************************************:
5jg8_A_1     440:PSATTYIGLNPGYRVYQIDGNYSGSSHVVLDHETYILNLTQANIPGAIPHWQLLYRARETYGLPNTLPTAWHNLVYRMRGDMQLFQTFWFLYHKGHPPSE: 539
SecStr          :E SS TTT   EEEEEEEE SSTT    EEEEEEEEE HHHHTSTT    EEEEEEHHHHHT S SSHHHHHHHHHHHHH HHHHHHHHHHHTTT   SS:    
ExpBur          :bbbbbeebbbbbbbbbbbbbeeeebbbbbebbbbbbbebeebeeeeeeeebeeebebeeebebeebebebbbebbeebeeeeebbeebbebbbbeeeeee:    

queryA       585:PCGTPCRLATLCAQLSARADSPALCRHLM: 613
                :*****************************:
5jg8_A_1     540:PCGTPCRLATLCAQLSARADSPALCRHLM: 568
SecStr          :   HHHHHHHHHHHH  SSS GGGGTT  :    
ExpBur          :ebeeeebeebbeebbbbbbebeebbeebe:

Protein Model on 5jg8_A_1_N_1 (TEMPLATE: 5jg8 )

Input Residue Numbers for Focused Sites