CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(ASM_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [442 aa] | Sphingomyelin phosphodiesterase :ASM_MOUSE | |
2 | b | N 1 (B) | non-polymer(NAG) | 2-acetamido-2-deoxy-beta-D-glucopyranose | 177N (identity: 100.0 %/89.4 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:5hqn_B_1 identity=89.4% |
queryA 171:DIFSSWNISLPTVPKPPPKPPSPPAPGAPVSRILFLTDLHWDHDYLEGTDPDCADPLCCRRGSGLPPASRPGAGYWGEYSKCDLPLRTLESLLSGLGPAG: 270 :**** ****** ******************** ********** ******* ************ ** * *** ****************** ******: 5hqn_B_1 13:DIFSTWNISLPSVPKPPPKPPSPPAPGAPVSRVLFLTDLHWDHEYLEGTDPYCADPLCCRRGSGWPPNSQKGAGFWGEYSKCDLPLRTLESLLKGLGPAG: 112 SecStr : S SS TT EEEEEEE B TTB TTS SS SSSS SBGGG SSGGGS SS SSS B HHHHHHHHHT GGG : ExpBur :eebeebebeeeeeeeeeeeeeeeeeeebeebebbbbbbbbbbeebeeebbbebeeebbbbeebeebeeeeebbbebbbbbebbbbeebbebbbeebeebe: Contact : b queryA 271:PFDMVYWTGDIPAHDVWHQTRQDQLRALTTVTALVRKFLGPVPVYPAVGNHESTPVNSFPPPFIEGNHSSRWLYEAMAKAWEPWLPAEALRTLRIGGFYA: 370 :** ************** * ********** * ************************ ****** ** ** **************** ** *********: 5hqn_B_1 113:PFEMVYWTGDIPAHDVWQQSRQDQLRALTTITDLVRKFLGPVPVYPAVGNHESTPVNGFPPPFIKGNQSSQWLYEAMAKAWEPWLPADALHTLRIGGFYA: 212 SecStr : SEEEE B S GGG HHHHHHHHHHHHHHHHHHHTTS EEE SSSSSSTT TTS STTSTHHHHHHHHHHTTTTS HHHHHHHHHHS EE: ExpBur :ebebbbbbbbbbbbbeeebeeeebeebbeebbebbeeebeeeebbbbbbbbbbeebbbbbbeebeeeebbebbbebbbebbeebbeeebbebbeebbbbb: queryA 371:LSPYPGLRLISLNMNFCSRENFWLLINSTDPAGQLQWLVGELQAAEDRGDKVHIIGHIPPGHCLKSWSWNYYRIVARYENTLAAQFFGHTHVDEFEVFYD: 470 :* * *********************************** ****** ************************* * ******** ************ ***: 5hqn_B_1 213:LTPRPGLRLISLNMNFCSRENFWLLINSTDPAGQLQWLVEELQAAENRGDKVHIIGHIPPGHCLKSWSWNYYKIIARYENTLAGQFFGHTHVDEFEIFYD: 312 SecStr :EEEETTEEEEE GGGGBTT GGGGT SSGGGHHHHHHHHHHHHHHHT EEEEE SS GGGB HHHHHHHHHHHHHTTTTEEEEEE SS SSEEEEEE : ExpBur :beebeebbbbbbbbbbbbeebebbeeebebbeebbebbbebbbebbeeebebbbbbbbbbbebbebbbebbbbbbbbbbbbbbbbbbbbbbbbbbbbbbb: queryA 471:EETLSRPLAVAFLAPSATTYIGLNPGYRVYQIDGNYSGSSHVVLDHETYILNLTQANIPGAIPHWQLLYRARETYGLPNTLPTAWHNLVYRMRGDMQLFQ: 570 :******************* * ************** ******************** * * * *********** * ********* * ****: 5hqn_B_1 313:EETLSRPLAVAFLAPSATTFINLNPGYRVYQIDGNYPGSSHVVLDHETYILNLTQANAAGGTPSWKRLYRARETYGLPDAMPASWHNLVYRMRDDEQLFQ: 412 SecStr :TTTS SEEEEEEE SS TTT EEEEEEEE SSTT EEEEEEEE HHHHSSTT EEEEEHHHHHT S SSHHHHHHHHHHHHH HHHHH: ExpBur :eeebeebbbbbbbbbbbbbbeebbbbbbbbbbbbeeeebbbbbebbbbbbbbbeebeeeeeeeebeebbebeeebebeebbbebbeebbbebeeeeebbe: queryA 571:TFWFLYHKGHPPSEPCGTPCRLATLCAQLSARADSPALCRHL: 612 :******************************************: 5hqn_B_1 413:TFWFLYHKGHPPSEPCGTPCRLATLCAQLSARADSPALCRHL: 454 SecStr :HHHHHHTTT SS HHHHHHHHHHTS SSSS GGGGTT : ExpBur :ebbebbbbbeeeeeebeeeebeebbeebbebbbebeebbeee: |