[pdbjlvh2]Protein Model on 5fic_A_1_R

Protein Model on 5fic_A_1_R_1 (TEMPLATE: 5fic )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(ASM_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [527 aa]	Sphingomyelin phosphodiesterase :ASM_MOUSE
2	b		R 1 (A)	non-polymer(6E0)	octadecylphosphonic acid	97L 100A 101I(L) 104G 105L 114V (identity: 83.3 %/88.4 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:5fic_A_1 identity=88.4%

queryA        88:NLTCPICKGLFTAINLGLKKEPNVARVGSVAIKLCNLLKIAPPAVCQSIVHLFEDDMVEVWRRSVLSPSEACGLLLGSTCGHWDIFSSWNISLPTVPKPP: 187
                :***** ** **** * ***************** *  * ***  **** ******* **** **************** ******** ****** *****:
5fic_A_1      11:NLTCPACKVLFTALNHGLKKEPNVARVGSVAIKICKMLNIAPLDVCQSAVHLFEDDVVEVWTRSVLSPSEACGLLLGSSCGHWDIFSTWNISLPSVPKPP: 110
SecStr          : THHHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHTTSS HHHHHHHHHHHHHHHHHHHHHTTTSHHHHHHHHH GGG    TT        SS    :    
ExpBur          :eeebeebeeebeeebeebeeeeebeeebeeebeebeeeeebbeebbeebbeebbebebebebebeeeeebbbbeeeeeebeeeebeeebebeeeeeeeee:    
Contact         :         b  bb  bb        b                                                                         

queryA       188:PKPPSPPAPGAPVSRILFLTDLHWDHDYLEGTDPDCADPLCCRRGSGLPPASRPGAGYWGEYSKCDLPLRTLESLLSGLGPAGPFDMVYWTGDIPAHDVW: 287
                :*************** ********** ******* ************ ** *  *** ****************** ******** **************:
5fic_A_1     111:PKPPSPPAPGAPVSRVLFLTDLHWDHEYLEGTDPYCADPLCCRRGSGWPPNSQKGAGFWGEYSKCDLPLRTLESLLKGLGPAGPFEMVYWTGDIPAHDVW: 210
SecStr          :        TT  EEEEEEE    B TTB TTS SS SSSS SBTTS   TTT     SS  SSS  B HHHHHHHHHTTTTT   SEEEE    B S GG:    
ExpBur          :eeeeeeeeeebeebbbbbbbbbbbbeebeeebbbebebebbbbeebeebeeeeeebbebbebeebbbbeebbebbbeebeebbebebbbbbbbbbbbbeb:    

queryA       288:HQTRQDQLRALTTVTALVRKFLGPVPVYPAVGNHESTPVNSFPPPFIEGNHSSRWLYEAMAKAWEPWLPAEALRTLRIGGFYALSPYPGLRLISLNMNFC: 387
                : * ********** * ************************ ****** ** ** **************** ** ********** * *************:
5fic_A_1     211:QQSRQDQLRALTTITDLVRKFLGPVPVYPAVGNHESTPVNGFPPPFIKGNQSSQWLYEAMAKAWEPWLPADALHTLRIGGFYALTPRPGLRLISLNMNFC: 310
SecStr          :G  HHHHHHHHHHHHHHHHHHHTTS EEE   SSSSSSTT    TT  STTSSHHHHHHHHHHHTTTS HHHHHHHHHHS EEE SSTTEEEEEE GGGS:    
ExpBur          :ebeeeebeebbeebbebbeeebeeeebbbbbbbbbbbbbbbbbbbebeeebbbebbbebbbebbeebbeeebbeebeebbbbbbeebeebbbbbbbbbbb:    

queryA       388:SRENFWLLINSTDPAGQLQWLVGELQAAEDRGDKVHIIGHIPPGHCLKSWSWNYYRIVARYENTLAAQFFGHTHVDEFEVFYDEETLSRPLAVAFLAPSA: 487
                :********************** ****** ************************* * ******** ************ ********************:
5fic_A_1     311:SRENFWLLINSTDPAGQLQWLVEELQAAENRGDKVHIIGHIPPGHCLKSWSWNYYKIIARYENTLAGQFFGHTHVDEFEIFYDEETLSRPLAVAFLAPSA: 410
SecStr          : TT GGGGT  SSGGGHHHHHHHHHHHHHHHT EEEEEESS GGGS HHHHHHHHHHHHHTTTTEEEEEE SS S EEEEEE TTTS SEEEEEEE   S:    
ExpBur          :beebbbbbeebebbeebbebbbebbbbbbeeebebbbbbbbbbbebbebbbebbbbbbbbbbbbbbbbbbbeebbbbbbbbbbeeebeebbbbbbbbbbb:    

queryA       488:TTYIGLNPGYRVYQIDGNYSGSSHVVLDHETYILNLTQANIPGAIPHWQLLYRARETYGLPNTLPTAWHNLVYRMRGDMQLFQTFWFLYHKGHPPSEPCG: 587
                :** * ************** ********************  *  * *  ***********   *  ********* * *********************:
5fic_A_1     411:TTFINLNPGYRVYQIDGNYPGSSHVVLDHETYILNLTQANAAGGTPSWKRLYRARETYGLPDAMPASWHNLVYRMRDDEQLFQTFWFLYHKGHPPSEPCG: 510
SecStr          :S TTT   EEEEEEEE SSTT    EEEEEEEEE HHHHSSTT    EEEEEEHHHHHT S SSHHHHHHHHHHHHH HHHHHHHHHHHTTT   SS   :    
ExpBur          :bbbeebbbbbbbbbbbbeeeebbbbbbbbbbbbbbbeebeeeeeeeebeebbebeeebebeebebebbbebbbebeeeeeebeebbebbbbbeeeeeebe:    

queryA       588:TPCRLATLCAQLSARADSPALCRHLMP: 614
                :***************************:
5fic_A_1     511:TPCRLATLCAQLSARADSPALCRHLMP: 537
SecStr          :HHHHHHHHHHHH  SSS GGGGTTT  :    
ExpBur          :eeebbebbeebbebbbebeebbeebee:

Protein Model on 5fic_A_1_R_1 (TEMPLATE: 5fic )

Input Residue Numbers for Focused Sites