Protein Model on 5fi9_B_1_K_1
(TEMPLATE: 
5fi9
)Protein Model on 5fi9_B_1_K_1
(TEMPLATE: 5fi9
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(ASM_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [529 aa] | Sphingomyelin phosphodiesterase :ASM_MOUSE | |
| 2 | b | K 1 (K) | branched(oligosaccharide) | alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | 88N 126K(N) 128A 129P (identity: 75.0 %/88.4 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:5fi9_B_1 identity=88.4% |
queryA 88:NLTCPICKGLFTAINLGLKKEPNVARVGSVAIKLCNLLKIAPPAVCQSIVHLFEDDMVEVWRRSVLSPSEACGLLLGSTCGHWDIFSSWNISLPTVPKPP: 187
:***** ** **** * ***************** * * *** **** ******* **** **************** ******** ****** *****:
5fi9_B_1 11:NLTCPACKVLFTALNHGLKKEPNVARVGSVAIKICKMLNIAPLDVCQSAVHLFEDDVVEVWTRSVLSPSEACGLLLGSSCGHWDIFSTWNISLPSVPKPP: 110
SecStr : HHHHHHHHHHHHTTTTTS STHHHHHHHHHHHHHTT S HHHHHHHHHHHSSSHHHHHHHTTS HHHHHHHHT GGG TTTT SS :
ExpBur :ebebebbeebbebbeebeeeeeeeeebbeebeeebeeeeebeeebbeebbeebbeeebebbbbeebeebbbbeebeeeebeeeebeeebebeeeeeeeee:
Contact :b b bb
queryA 188:PKPPSPPAPGAPVSRILFLTDLHWDHDYLEGTDPDCADPLCCRRGSGLPPASRPGAGYWGEYSKCDLPLRTLESLLSGLGPAGPFDMVYWTGDIPAHDVW: 287
:*************** ********** ******* ************ ** * *** ****************** ******** **************:
5fi9_B_1 111:PKPPSPPAPGAPVSRVLFLTDLHWDHEYLEGTDPYCADPLCCRRGSGWPPNSQKGAGFWGEYSKCDLPLRTLESLLKGLGPAGPFEMVYWTGDIPAHDVW: 210
SecStr : TT EEEEEEE B TTB TTS TT SSSS SBTTS SSS SS SSS B HHHHHHHHHT TTT SEEEE B S GG:
ExpBur :eeeeeeeeeebeebebbbbbbbbbbebbeeebbbebeeebbbbeebeebeeeeeebbebbbbbebbbbeebbebbbeebeebbebebbbbbbbbbbbbee:
queryA 288:HQTRQDQLRALTTVTALVRKFLGPVPVYPAVGNHESTPVNSFPPPFIEGNHSSRWLYEAMAKAWEPWLPAEALRTLRIGGFYALSPYPGLRLISLNMNFC: 387
: * ********** * ************************ ****** ** ** **************** ** ********** * *************:
5fi9_B_1 211:QQSRQDQLRALTTITDLVRKFLGPVPVYPAVGNHESTPVNGFPPPFIKGNQSSQWLYEAMAKAWEPWLPADALHTLRIGGFYALTPRPGLRLISLNMNFC: 310
SecStr :G HHHHHHHHHHHHHHHHHHHTTS EEE SSSSSSTT TTS STTSTHHHHHHHHHHTTTTS HHHHHHHHHHS EEEEEETTEEEEE GGGT:
ExpBur :ebeeebbeebbeebbebbeeebeeeebbbbbbbbbbbebbbbbbeeeeeeebbebbbebbbebbeebbeeebbeebeebbbbbbeebeebbbbbbbbbbb:
queryA 388:SRENFWLLINSTDPAGQLQWLVGELQAAEDRGDKVHIIGHIPPGHCLKSWSWNYYRIVARYENTLAAQFFGHTHVDEFEVFYDEETLSRPLAVAFLAPSA: 487
:********************** ****** ************************* * ******** ************ ********************:
5fi9_B_1 311:SRENFWLLINSTDPAGQLQWLVEELQAAENRGDKVHIIGHIPPGHCLKSWSWNYYKIIARYENTLAGQFFGHTHVDEFEIFYDEETLSRPLAVAFLAPSA: 410
SecStr : TT GGGGT SSGGGHHHHHHHHHHHHHHHT EEEEE SS GGGS HHHHHHHHHHHHHTTTTEEEEEE SS SSEEEEEE TTTS SEEEEEEE S:
ExpBur :bbebeebeeebebbeebbebbbebbbebbeeebebbbbbbbbbbebbebbbebbbebbbbbbbbbbbbbbbbbbbbbbbbbbbeeebeebbbbbbbbbbb:
queryA 488:TTYIGLNPGYRVYQIDGNYSGSSHVVLDHETYILNLTQANIPGAIPHWQLLYRARETYGLPNTLPTAWHNLVYRMRGDMQLFQTFWFLYHKGHPPSEPCG: 587
:** * ************** ******************** * * * *********** * ********* * *********************:
5fi9_B_1 411:TTFINLNPGYRVYQIDGNYPGSSHVVLDHETYILNLTQANAAGGTPSWKRLYRARETYGLPDAMPASWHNLVYRMRDDEQLFQTFWFLYHKGHPPSEPCG: 510
SecStr :S TTT EEEEEEEE SSTT EEEEEEEEE HHHHTSTT EEEEEEHHHHHT S SHHHHHHHHHHHHH HHHHHHHHHHHTTT SS :
ExpBur :bbbeebbbbbbbbbbbbeeeebbbbbbbbbbbbbbbeebeeeeeebebeebbebeeebebeebbbebbbebbbebeeeeebbeebbebbbbbeebeeebe:
queryA 588:TPCRLATLCAQLSARADSPALCRHLMP: 614
:***************************:
5fi9_B_1 511:TPCRLATLCAQLSARADSPALCRHLMP: 537
SecStr :HHHHHHHHHHHT SSSS GGGGGGG :
ExpBur :eebbbebbbebbbbbbbbeebbeebee:
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[assembly_id:2]
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