[pdbjlvh2]Protein Model on 5fc7_A_1_H

Protein Model on 5fc7_A_1_H_1 (TEMPLATE: 5fc7 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(ASM_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [423 aa]	Acid sphingomyelinase-like phosphodiesterase 3a :ASM3A_MOUSE
2	b		H 1 (A)	non-polymer(NAG)	2-acetamido-2-deoxy-beta-D-glucopyranose	397N 398S(K) 436S(Y) (identity: 33.3 %/34.8 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:5fc7_A_1 identity=34.8%

queryA       191:PSPPAPGAP-VSRILFLTDLHWDHDYLEGTDPDCADPLCCRRGSGLPPASRPGAGYWGEYSKCDLPLRTLESLLSGLGPAG-PFDMVYWTGDIPAHD-VW: 287
                :*  **   * *      **** *  *   ** *         *     ** **    *    ** *     *        *       **** * *  * :
5fc7_A_1      12:PLAPAXXXPAVGQFWHVTDLHLDPTY-HITD-DRTKVCASSKGAN---ASNPGP--FGD-VLCDSPYQLILSAFDFIKNSGQEASFMIWTGDSPPHVPVP: 103
SecStr          :     ---   EEEEEE    B TT -   S-SGGGS GGGTTS --- SS BT--TB -TTS B HHHHHHHHHHHHHS    SEEEE    S S  GG:    
ExpBur          :eeeee---eeebbbbbbbbbbbbeeb-eeee-eeeebbebbeebe---beebbb--bbb-bbbbbbeebbebbbebbeeeeeebebbbbbbbbbbebeee:    

queryA       288:HQTRQDQLRALTTVTALVRKFLGPVPVYPAVGNHESTPVNSFPPPFIEGNHSSRWLYEAMAKAWEPWLPAEALRTLRIGGFYA--LSPYPGLRLISLNMN: 385
                :           *  *  *        * ** ***   *    *             * * *  * ***  **  **  ****       **** **** *:
5fc7_A_1     104:ELSTGTVIKVITNMTMTVQNLFPNLQVFPALGNHDYWPQDQLPI-------VTSKVYSAVADLWKPWLGEEAISTLKKGGFYSQKVASNPGLRIISLNTN: 196
SecStr          :G  HHHHHHHHHHHHHHHHHH TT EEEE   TTSSSSTT   S-------S  HHHHHHHHHHGGG  HHHHHHHHHHS EEEE TTSTTEEEEE  GG:    
ExpBur          :ebeeeebeebbeebbebbbeebeebbbbbbbbbbbbeeebbbbe-------eebebbbbbbebbeebbeeebeebbeebbbbbeebeebeebbbbbbbbb:    

queryA       386:FCSRENFWLLINSTDPAGQLQWLVGELQAAEDRGDKVHIIGHIPPGH---------CLKSWSWNYYRIVARYENTLAAQFFGHTHVDEFEVFYDEETLSR: 476
                :     *     * **** *  **   *        ** ** * * *                     *  **    * ** **** *   *  *      :
5fc7_A_1     197:LYYGPNI-MTLNKTDPANQFEWLENTLNSSLWNKEKVYIIAHVPVGYLPYATDTPAIRQYYNEKLLDIFRRYSSVIAGQFYGHTHRDSLMVLSDKN--GN: 293
SecStr          :GG TT T-TSTT SSGGGHHHHHHHHHHHHHHTT EEEEE SS SSB TTSSS BSS HHHHHHHHHHHHHTTTTEEEEEE SS S EEEEEE TT--  :    
ExpBur          :bbbeebe-ebeeeeebbebbebbeebbeebeeeebebbbbbbbbbbbbbebeeebbbbeebbeebbebbeebbebbebbbbbbbbbbbbbbbbeee--ee:    
Contact         :           bb                                              b                                        

queryA       477:PLAVAFLAPSATTYIGL------NPGYRVYQIDGNYSGSSHVVLDHETYILNLTQANIPGAIPHWQLLYRARETYGLPNTLPTAWHNLVYRM-RGDMQLF: 569
                :**   * **  *   *       *** *  *    *       **   * **** **  *    * * *     *      *     **      *   *:
5fc7_A_1     294:PLNSVFVAPAVTPVKGVLQKETNNPGVRLFQ----YKPGDYTLLDMVQYYLNLTEANLKGE-SNWTLEYVLTQAYSVADLQPKSLYALVQQFATKDSKQF: 388
SecStr          :EEEEEEE   S     SS S     EEEEEE----E TTT  EEEEEEEE  HHHHHHHT -   EEEEEHHHHHT S SSHHHHHHHHHHHHSTT HHH:    
ExpBur          :eebbbbbbbbbbbbbeeeeebbbbbbbbbbe----beeeebebebbbbbbbebeebbeeee-eebeebbbbbebbebebbeeebbeebbeebeeeebebb:    

queryA       570:QTFWFLYHKGHPPSEPCGTPCRLATLCA--QLSARADSPALCRHL: 612
                :      *      *  *   *     **   *        *  **:
5fc7_A_1     389:LKYYHYYFVSYDSSATCDQHCKTLQVCAIMNLDSMSYDDCLKQHL: 433
SecStr          :HHHHHHHTTTS TT    HHHHHHHHHHHH  SHHHHHHHHHHH :    
ExpBur          :eebbebbbbbeeeebebeeebbbbbbbbbbebbbebbeebbeeee:

Protein Model on 5fc7_A_1_H_1 (TEMPLATE: 5fc7 )

Input Residue Numbers for Focused Sites