CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(ASM_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [410 aa] | Acid sphingomyelinase-like phosphodiesterase 3a :ASM3A_HUMAN | |
2 | b | F 1 (A) | non-polymer(NAG) | 2-acetamido-2-deoxy-beta-D-glucopyranose | 224A(T) 232G 234G(N) (identity: 33.3 %/34.6 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:5ebb_A_1 identity=34.6% |
queryA 193:PPAPGAPVSRILFLTDLHWDHDYLEGTDPDCADPLCCRRGSGLPPASRPGAGYWGEYSKCDLPLRTLESLLSGLGPAG-PFDMVYWTGDIPAHDVWHQTR: 291 :*** * **** * * ** * * ** ** * ** * * * **** * * : 5ebb_A_1 1:PPAIG----QFWHVTDLHLDPTY-HITD-DHTKVCASSKGAN---ASNPGP--FGDV-LCDSPYQLILSAFDFIKNSGQEASFMIWTGDSPPHVPVPELS: 88 SecStr : S E----EEEEE B TT - S- GGGS GGGTTS --- SS BT--TB T-TS B HHHHHHHHHHHHHTT SEEEE S GGG : ExpBur :eeeeb----bbbbbbbbbbbeeb-eeee-eeeebbbbbeeee---beebbe--bbbb-bbbbbeebbebbbebbeeeeeeeebbbbbbbbbbebeeeebe: Contact : b b b queryA 292:QDQ-LRALTTVTALVRKFLGPVPVYPAVGNHESTPVNSFPPPFIEGNHSSRWLYEAMAKAWEPWLPAEALRTLRIGGFYA--LSPYPGLRLISLNMNFCS: 388 : * * * * ** *** * * * * * * *** ** *** **** * ** **** * : 5ebb_A_1 89:TDTVINVITNMTTTIQSLFPNLQVFPALGNHDYWPQDQLPV-------VTSKVYNAVANLWKPWLDEEAISTLRKGGFYSQKVTTNPNLRIISLNTNLYY: 181 SecStr :HHHHHHHHHHHHHHHHHH TT EEE TTSSSSTT S-------S HHHHHHHHHHTTTS HHHHHHHHHHS EEEEETTEEEEEEEE GGGGB: ExpBur :eeebbebbeebbebbeeebeebbbbbbbbbbbbeeebbbbe-------eebebbebbbebbeebbeeebbeebeebbbbbbebeebeebbbbbbbbbbbb: queryA 389:RENFWLLINSTDPAGQLQWLVGELQAAEDRGDKVHIIGHIPPGHCLKSWSWN----YYR-----IVARYENTLAAQFFGHTHVDEFEVFYDEETLSRPLA: 479 : * * **** * ** * ** ** * * * * ** * * * ** **** * * * * : 5ebb_A_1 182:GPNI-MTLNKTDPANQFEWLESTLNNSQQNKEKVYIIAHVPVGYLPSSQNITAMREYYNEKLIDIFQKYSDVIAGQFYGHTHRDSIMVLSDKK--GSPVN: 278 SecStr :TT G-GGTT SSGGGHHHHHHHHHHHHHHTT EEEEE SS SSB TTSSS BSB HHHHHHHHHHHHHTTTTEEEEEE SS S EEEEEE TT--S EEE: ExpBur :eebe-ebeeeeebbebbeebeebbeebeeeebebbbbbbbbbbbebeeeeebbbbeebbbebbebbbebeebbebbbbbbebbbbbbbbbeee--eebbb: queryA 480:VAFLAPSATTYIGL------NPGYRVYQIDGNYSGSSHVVLDHETYILNLTQANIPGAIPHWQLLYRARETYGLPNTLPTAWHNLVYRMRG-DMQLFQTF: 572 : * ** * *** * * * ** * **** ** * * * * ** * * * * : 5ebb_A_1 279:SLFVAPAVTPVKSVLEKQTNNPGIRLFQ----YDPRDYKLLDMLQYYLNLTEANLKGE-SIWKLEYILTQTYDIEDLQPESLYGLAKQFTILDSKQFIKY: 373 SecStr :EEEE S TT S EEEEEE----E TTT EEEEEEEEE HHHHHHHT - EEEEEEHHHHHT S SSHHHHHHHHHHHTSTT HHHHHH: ExpBur :bbbbbbbbbbbbeeeeebbbbbbbbbbe----bbeeebebbbbbbbbbebebbbeeee-eebeebbebbebbebebbebebbeebbeebeeeebebbeeb: queryA 573:WFLYHKGHPPSEPCGTPCRLATLCAQLSARADSPALC: 609 : * * * ** * * *: 5ebb_A_1 374:YNYFFVSYDSSVTCDKTCKAFQICAIMNLDNISYADC: 410 SecStr :HHHHTTTS TT HHHHHHHHHHHH SHHHHHH : ExpBur :bebbbbeeeeebebeeeebebbbbbbbbbbeeebeee: |