Protein Model on 8fo8_A_1_C_1 (TEMPLATE: 8fo8 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(RAB7A_HUMAN) A 1 (A) polymer(polypeptide(L)) [172 aa] Ras-related protein Rab-7L1 :RAB7L_HUMAN
2 b C 1 (C) polymer(polypeptide(L)) [2270 aa] Leucine-rich repeat serine/threonine-protein kinase 2 :LRRK2_HUMAN 67Q(L) 69R 70F 91T 92A(N) 93P(A) 94N(T) 96F 97K(S) 100D(Q) 140Q (identity: 45.5 %/38.0 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:8fo8_A_1 identity=38.0%
queryA         8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDD-RLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEF: 106
                :* **   **  ******   *    **  ** * * **  *     *   *  * ** ** ***       ** *  **  ****   **     *    :
8fo8_A_1       7:LFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDYEIVRLQLWDIAGLERFAAMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDL: 106
SecStr          :EEEEEEE  TTS HHHHHHHHTT   S       S EEEEEEEEEETTEEEEEEEEE   TTSSS   HHHHTT  EEEEEEETT HHHHHHHHHHHHHH:    
ExpBur          :eebbbbbbbeebbbebbbebeeeeeeeeeeeebeeeeebebebeeeeebebbbebebbbbeeeeeeeeeeebeeeebbbbbbbbeeeebeebbeebeeeb:    
Contact         :                                                            b bb                    bbbb bb  b      

queryA       107:LIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNN--IPYFETSAKEAINVEQAFQTIARNALK: 175
                :         *  *   * ** **     *  * *    ** *      *** **  *   *          :
8fo8_A_1     107:DSKLTLPNGEPVPCLLLANKCDLS--PWAVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMR: 175
SecStr          :HHS   SS S    EEEEE  SSS--SSSS HHHHHHHHHHTT SEEEE  TTTTSSHHHHHHHHHHHHHH:    
ExpBur          :eebeebeeeeebebbbbbbebeee--eeeeeeeeeeebbeebebebeeebbbeeeeebeebbbebbbbbee:    
Contact         :                                 b                                                                  


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