Protein Model on 6rir_A_1_C_1
(TEMPLATE: 
6rir
)Protein Model on 6rir_A_1_C_1
(TEMPLATE: 6rir
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[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RAB7A_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [173 aa] | Ras-related protein Rab-8A :RAB8A_HUMAN | |
| 2 | b | C 1 (D) | polymer(polypeptide(L)) [32 aa] | RILP-like protein 2 :RIPL2_HUMAN | 41I 43A(I) 44D 45F 47T(I) 62W 70F 72S(U) 73L(I) 77F(Y) (identity: 50.0 %/41.2 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:6rir_A_1 identity=41.2% |
queryA 8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107
:* * ******** * *** ** * ******* *** * **** ** * * * * :
6rir_A_1 11:LFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGLERFRUITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE: 110
SecStr :EEEEEEE STTSSHHHHHHHHHHS SEEEEEEEEEETTEEEEEEEEEE SGGGHHHHHTTTTT SEEEEEEETT HHHHHTHHHHHHHHH:
ExpBur :ebebbbbbbeebbbebbbebbeeeeeeeeeeebebbeeeeeebebeeeebebbbbbbbbeeebeeebbeebeebebbbbbbbbbeeebbeebeebbebbe:
Contact : b bbb b b b bb b
queryA 108:IQASPRDPENFPFVVLGNKIDL-ENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARN: 172
: ** * * **** * *** * * ***** **** ** * ** :
6rir_A_1 111:EHASA-DVEK---MILGNKCDVNDKRQVSKERGEKLALDY-GIKFMETSAKANINVENAFFTLARD: 171
SecStr :HHS T-T EE---EEEEE TT GGG S HHHHHHHHHHH-T EEEE BTTTTBSHHHHHHHHHHH:
ExpBur :eebee-ebee---bbbbbebeeeeeeebeeeebeebbeee-ebebbbbbbeeeeebeebbbbbbee:
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[assembly_id:1]
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