Protein Model on 6a38_A_1_C_1
(TEMPLATE: 
6a38
)Protein Model on 6a38_A_1_C_1
(TEMPLATE: 6a38
)| CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RAB7A_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [210 aa] | GTP-binding nuclear protein Ran :RAN_HUMAN | |
| 2 | b | C 1 (C) | polymer(polypeptide(L)) [996 aa] | Exportin-1 :XPO1_YEAST | 43A(V) 45F(V) 62W 69R(K) 72S(G) 73L 74G(R) 75V(D) 76A(G) 77F(Y) 79R(I) 80G(Q) 101S(N) 104D(R) 113R 114D(V) 116E 144Y(H) 145S(R) 146K 148N 150P(Q) 151Y 172N(K) (identity: 29.2 %/34.0 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:6a38_A_1 identity=34.0% |
queryA 6:KVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDE: 105
: * * ** * *** * * ** * ******* * * * * * **** * * * :
6a38_A_1 27:QVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRD: 126
SecStr : SEEEEEEE TTSSHHHHHHHHHTS S SEEEEEEEEEETTEEEEEEEEEE SSTT TTGGGGGTT EEEEEEETT HHHHHTHHHHHHH:
ExpBur :eeebbbbbbbbeebbbbbbbebbeeeeebeeeeebebeeeeebebebeeeebebebebbbbeeeebeeeeebbeebebbbbbbbbeeeebbeebeebbee:
Contact : b b b b bbbbbb bb b b
queryA 106:FLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNAL: 174
: * ** * * *** * * * * * * * *** * * * ** :
6a38_A_1 127:LV-----RVCENIPIVLCGNKVDIKDRKVKAKSIV--FHRKKNLQYYDISAKSNYNFEKPFLWLARKLI: 188
SecStr :HH-----HH SS EEEEEE TTSSS S GGG --TTTTTT EEEE TTT TTTTHHHHHHHHHHH:
ExpBur :be-----eebeeeebbbbbbeeeeeeeebeeeebe--ebeeeebebbebbbeeeebeeebbbbbbeeee:
Contact : bb b bbb b bb b
|
[assembly_id:1]
[help]