Protein Model on 5ub8_A_1_A_2
(TEMPLATE: 
5ub8
)Protein Model on 5ub8_A_1_A_2
(TEMPLATE: 5ub8
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RAB7A_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [174 aa] | Likely rab family GTP-binding protein :Q59KX4_CANAL | |
| 2 | b | A 2 (A) | polymer(polypeptide(L)) [174 aa] | Likely rab family GTP-binding protein :Q59KX4_CANAL | 8L 9L(Y) 55R(K) 80G 82D(V) 117N 119P(I) (identity: 42.9 %/34.4 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:5ub8_A_1 identity=34.4% |
queryA 8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107
:* * ******* * * * * * * * ********** * **** * * * * :
5ub8_A_1 15:LYKIVLIGDSGVGKSNLLSRFTRDEFNLEXXXXXGVEFATRTLEIDGKRVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELK: 114
SecStr :EEEEEEEE TTSSHHHHHHHHHS ----- EEEEEEEETTEEEEEEEE SGGGTS HHHHTT SEEEEEEETT HHHHHTHHHHHHHHH:
ExpBur :ebbbbbbbbeebbbeebbbbbeeeeeeee-----eeeebeeebebeeeebebebebbeebbeeeebeeebbeebebbbbbbbbeeeebbebbeebbebbe:
Contact :bb b b b
queryA 108:IQASPRDPENFPFVVLGNKIDLEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARN: 172
: * * *** ** * * * * ** * ** ** * *:
5ub8_A_1 115:EHADA----NIIIELVGNKSDLDHLRAVPTEEAKNFA-MENNLLFTEASALSSDNVDLSFHQLLKN: 175
SecStr :HHS T----T EEEEEEE TT GGG S HHHHHHHH-HHTT EEEE BTTTTBTHHHHHHHHHHH:
ExpBur :eebee----ebbbbbbbbebeeeeeeebeeeebeeeb-eeeebebbbbbbeeeeebeebbeebbee:
Contact : b b
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[assembly_id:1]
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