Protein Model on 4kyi_B_1_A_1 (TEMPLATE: 4kyi )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(RAB7A_HUMAN) B 1 (B) polymer(polypeptide(L)) [164 aa] Ras-related protein Rab-5C :RAB5C_HUMAN
2 b A 1 (A) polymer(polypeptide(L)) [530 aa] VipD :Q5ZRP9_LEGPH 41I 42G 43A 44D(A) 45F 60Q(E) 62W 69R 70F(Y) 72S 73L 76A(M) 79R (identity: 69.2 %/44.3 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:4kyi_B_1 identity=44.3%
queryA         9:LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLI: 108
                : *   ** * *** **    *   *      **** ***  *  **  *   ****** **  **    ****     * * *   **     *  *   :
4kyi_B_1      10:FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGLERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQR: 109
SecStr          :EEEEEE  TTSSHHHHHHHHHT    TT     SEEEEEEEEEETTEEEEEEEEEE  SGGGGGGHHHHHSS SEEEEEEETT HHHHHHHHHHHHHHHH:    
ExpBur          :bbbbbbbeeebbbebbbbebeeeeeeeeeeebeeeeeeeeebebeeeebbbebebbbbeeeeeeebeebbeebebbbbbbbbeeeebbebbeebbeebee:    
Contact         :                                bbbbb              b b      bb bb  b  b                             

queryA       109:QASPRDPENFPFVVLGNKIDLEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR: 171
                :****    *      *** **   * *    ***     *     ***** * **   *  ** :
4kyi_B_1     110:QASP----NIVIALAGNKADLASKRAVEFQEAQAYA-DDNSLLFMETSAKTAMNVNEIFMAIAK: 168
SecStr          :HS T----T EEEEEEE TT GGG  S HHHHHHHH-HHTT EEEE BTTTTBTHHHHHHHHHH:    
ExpBur          :ebee----ebbbbbbbbebeeeeeeebeeeebeebb-eeeebbbebbbbeeeeebeebbebbbe:    


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