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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(RAB7A_HUMAN) | F 1 (F) | polymer(polypeptide(L)) [166 aa] | GTP-binding protein YPT1 :YPT1_YEAST | |
2 | b | E 1 (E) | polymer(polypeptide(L)) [188 aa] | Transport protein particle 22 kDa subunit :BET3_YEAST | 17S 19V 21K 22T(S) 37Y 39A(S) 65A (identity: 71.4 %/38.1 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:3cue_F_1 identity=38.1% |
queryA 8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107 :* * * ***** * * *** ** * * * * *********** *** * *** * * * : 3cue_F_1 8:LFKLLLIGNSGVGKSCLLLRFSDDXXXXXYISTIGVDFKIKTVELDGKTVKLQIWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEID: 107 SecStr :EEEE TTS HHHHHHTTS ----- SS EEEEEEEETTEEEEEEEE SSTHHHHHHHHSSS SBEEEE SS THHHHHHHHHHHHHH: ExpBur :ebebbbbbeeebebeeebeeebee-----eeeeebbbebebebebeeebbebbbbbbebeeeeeebbeebbeebebbbbbbbbeeeebbebbeebbeebe: Contact : b b bb b b b queryA 108:IQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR: 171 : * *** ** * * * **** *** ** * **: 3cue_F_1 108:RYATSTVLK----LLVGNKCDLKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMAR: 167 SecStr :HHS TT E----EEE S S TTS S HHHHHHHHHHHT B SSS THHHHHHHHHHH: ExpBur :eebeeebee----bbbbbebeeeeeeebeeeebeebbeeeebebebbeeeebeebeebbeebbe: |