Protein Model on 3bc1_A_1_B_1
(TEMPLATE: 
3bc1
)Protein Model on 3bc1_A_1_B_1
(TEMPLATE: 3bc1
)| CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RAB7A_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [185 aa] | Ras-related protein Rab-27A :RB27A_MOUSE | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [52 aa] | Synaptotagmin-like protein 2 :SYTL2_HUMAN | 8L 41I(V) 43A(I) 44D 45F 47T(E) 58T(H) 60Q 62W 69R 70F 73L 77F 80G(D) 81A 82D(M) 111S(Y) (identity: 58.8 %/39.6 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:3bc1_A_1 identity=39.6% |
queryA 8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVD----------DRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFK: 97
:* * ********** ** ** * * ** * * * ***** *** ** ** * * * ** * * :
3bc1_A_1 11:LIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRANGPDGAVGRGQRIHLQLWDTAGLERFRSLTTAFFRDAMGFLLLFDLTNEQSFL: 110
SecStr :EEEEEEE STTSSHHHHHHHHHHS S SEEEEEEEEEE TTS SS EEEEEEEEEE SGGGHHHHHHTTTT SEEEEEEETT HHHHH:
ExpBur :ebebbbbbbeebbbeebbebbbeeeeeeeeeebebeeeeeeebebeeeeeeeeeeeeeebbbbbbbbbbeeebeeebbeebeebebbbbbbbbeeeebbe:
Contact :b b bbb b b b b bb b b bbb
queryA 98:TLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTI: 169
: * * * * *** *** * ******** * * :
3bc1_A_1 111:NVRNWISQLQMHAYSENPD---IVLCGNKSDLEDQRAVKEEEARELAEKYGIPYFETSAANGTNISHAIEML: 179
SecStr :THHHHHHHHHHHSSSSS ---EEEEEE TT GGG S HHHHHHHHHHHT EEE TTT TTHHHHHHHH:
ExpBur :ebeebbeebeeebeeeebb---bbbbbbeeeeeeeeebeeeebeebbeeeebebbbbbbeeeeebeebbeeb:
Contact : b
|
[assembly_id:1]
[help]