[pdbjlvh2]Protein Model on 7ytp_A_1_K

Protein Model on 7ytp_A_1_K_1 (TEMPLATE: 7ytp )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(TLR3_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [731 aa]	Toll-like receptor 7 :B3Y653_MACMU
2	b		K 1 (A)	non-polymer(NAG)	2-acetamido-2-deoxy-beta-D-glucopyranose	377G(H) (identity: 0.0 %/34.9 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:7ytp_A_1 identity=34.9%

queryA       358:EHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLEN: 457
                :  *    * *  ***  *  *  ** * **    *  **    *  **   *  *    *      * **  *  *****   *              * :
7ytp_A_1     492:QTLDLSKNSIFFIKSSDFQHLSFLKCLNLSGNLIS-QTLNGSEFQPLAE--LRYLDFSNNRLDLLHSTAFEELRKLEVLDISSNS--------HYFQSEG: 580
SecStr          : EEE TT S  S  TTTTTT TT SEEE TTS  E-EE  S TT S SS--  EEE  SSEEE   TTTT S TT  EEE  S H--------HHHHSSS:    
ExpBur          :ebbbbbebebeebeeebbeebebbbbbbbbebebe-bebebebbebbee--bebbbbbebebbbeeeebbebbeebebbbbbebe--------eebeeee:    
Contact         :                   b                                                                                

queryA       458:IFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTI----LDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGG: 553
                :*    *   * *            ** **          *       ** *      **       *        * *** **   * *  *      * :
7ytp_A_1     581:ITHM-LNFTKNLKV----------LQKLMMNDNDISSSTSRTMESESLRTLEFRGNHLDVLWRDGDNRYLQLFKNLLKLEELDISKNSLSFLPSGVFDGM: 669
SecStr          :S   -GGGGTT SS----------  EEE  S      SSS   BSS  EEE  SS HHHHT TT  TTTTSSTTBTT  EEE  SS  SB  TTTGGGS:    
ExpBur          :eebe-bebbeebee----------beebbbbebebbbbebeebbbebbebbbbebbebeebbeeebeebbebbeebeebeebbbbebebeebbebbbebb:    

queryA       554:PIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFR------------------: 635
                :*         *  * *  **      *    *  *   **  * * * *    *   *** * *  * * *  *     **                   :
7ytp_A_1     670:P-------PNLKNLSLAKNGLKSFIWEKLRYLKNLETLDLSHNQLTTVPERLSNCSRSLKNLILKNNQIRSLTKYFLQDAFQLRYLDLSSNKIQMIQKTS: 762
SecStr          : -------TT  EEE TTS  SB  SGGGGG TT  EEE TT       S HHHH SS  B B TT       TTTTTT TT  EEE  S       TTT:    
ExpBur          :b-------eebeebbbbebebeebebebbeebeebebbbbbebebeebbeebbebbeebeebebeebebeebbeebbeebebbeebbbbbbebeebbeeb:    

queryA       636:-------NLTELDMRFNPFDCTCESIAWFVNWINETHTNIPELSSHYLCNTPPHYHG: 685
                :       **  *    * * ***    *** *   *   ** *     *  *    *:
7ytp_A_1     763:FPENVLNNLKMLLLHHNRFLCTCDAV-WFVWWVQHTEVTIPYLATDVTCVGPGAHKG: 818
SecStr          :S HHHHTS  EEE  SS    SGGGH-HHHHHHTT     TTTTTTSB   SGGGTT:    
ExpBur          :bbeebbeebebbbbbebebebeeebe-ebeebbeebebebeeebeebebebeeeeee:

Protein Model on 7ytp_A_1_K_1 (TEMPLATE: 7ytp )

Input Residue Numbers for Focused Sites