Protein Model on 7wrq_A_1_G_1 (TEMPLATE: 7wrq )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(TLR3_HUMAN) A 1 (A) polymer(polypeptide(L)) [566 aa] Insulin-like growth factor-binding protein complex acid labile subunit :ALS_HUMAN
2 b G 1 (A) non-polymer(NAG) 2-acetamido-2-deoxy-beta-D-glucopyranose 539H(N) (identity: 0.0 %/31.7 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7wrq_A_1 identity=31.7%
queryA        37:CSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQ: 136
                :**   **  **  *     * *  * *   * * *   * *  *         ***     *  *  * *  * *  *   ***    *  * *  *   :
7wrq_A_1      33:CSSRNLTRLPDGVPGGTQALWLDGNNLSSVPPAAFQNLSSLGFLNLQGGQLGSLEPQALLGLENLCHLHLERNQLRSLALGTFAHTPALASLGLSNNRLS: 132
SecStr          :  SS   S  SS  SS S EE TTS   SB SSSS S    S EE  SS    B TTTTTT SS    B TTS      TTTTSS  S    B TT    :    
ExpBur          :bbeeeeeeeeeeebeebebbebeebebeebeeeebeebeebeebbbeeeebeeeeeebbeebeebeebebbebebeebeeebbeebeebebbbbbebebe:    

queryA       137:KIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPS: 236
                :      *     *  * *  * *          *  * ** *  *    *        *   *  * ** *         *    **  * *        :
7wrq_A_1     133:RLEDGLFEGLGSLWDLNLGWNSLAVLPDAAFRGLGSLRELVLAGNRLAYLQPALFSGLA--ELRELDLSRNALRAIKANVFVQLPRLQKLYLD-------: 223
SecStr          :   SS S S TT    B  SS      TTSS S TT   EE  SS      TTSS S T--T  EEE TTS    B SSSSSS TT  EEE  -------:    
ExpBur          :ebeebbbeebeebeebebbebebeebeeebbeebeebeebebbebebeebbeebbeebe--ebeebebbebebeebeeebbeebeebebbebb-------:    

queryA       237:LTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQ: 336
                :              ***              *****   *  **** *       * *  *  *    *  * *  *       *     * *      *:
7wrq_A_1     224:--------------RNL------IAAVAPGAFLGLK--ALRWLDLSHNRVAGLLEDTFPGLLGLRVLRLSHNAIASLRPRTFKDLHFLEELQLGHNRIRQ: 301
SecStr          :--------------BS ------   B TT S S  --S       BS      SSSS S TT      TTS      TT S S TT       S     :    
ExpBur          :--------------ebe------beeeeeebbeebe--ebeebbbbebebeebeeebbeebeebebbebbebebeeeeeebbeebeebeebebbebebee:    

queryA       337:SISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVL: 436
                :             **  *  ** *    *     *   * ** *     **     ** *    *  *    ** * *       *    *  *  *  *:
7wrq_A_1     302:---------LAERSFEGLGQLEVLTLDHNQLQEVKAGAFLGLTNVAVMNLSGN--CLRNLPEQVFRGLGK--LHSLHLEGSCLGRIRPHTFTGLSGLRRL: 388
SecStr          :---------B TT S S TT  B    SS    B TTSS S  S  EE  TTS--   S  SSTT S   --  EE  TTS    B TTSS S TT  EE:    
ExpBur          :---------beeebbeebeebeebbbbebebeebeeebbeebeebeebebbeb--ebeebeeebbeebee--bebbebeebbbeebeeebbeebebbeeb:    

queryA       437:---DLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLE: 533
                :   * **  *      *   **    *  *  *    *    *     *  * * *  *           **     ** * *         *  *  * :
7wrq_A_1     389:FLKDNGLVGIEE----QSLWGLAELLELDLTSNQLTHLPHRLFQGLGKLEYLLLSRNRLAELPA--DALGPLQRAFWLDVSHNRLEALPNSLLAPLGRLR: 482
SecStr          :   SS  S B T----TSSSS  S      TT       TTSSSS      EE TT       S--STTSS  S   EE TTS      GGGSTT     :    
ExpBur          :bbeebebeebee----ebbeebeebebbbbbebebeebeeebbeebeebeebbbbebebeebbe--ebbeebeebeebbbbebebeeeeeebbeebeebe:    

queryA       534:ILDLQHN----------NLARLWKHANP---GGPIYFLK: 559
                : * *  *           * ***   **   * *   * :
7wrq_A_1     483:YLSLRNNSLRTFTPQPPGLERLWLEGNPWDCGCPLKALR: 521
SecStr          :  B  S          TT    B TTS    SSS  HHH:    
ExpBur          :ebbbeebebeebeeebeebeebbbeebebebbeebeebb:    
Contact         :     b                                                                                              


Input Residue Numbers for Focused Sites

ex) 2,15,123