[pdbjlvh2]Protein Model on 7r53_A_1_O

Protein Model on 7r53_A_1_O_1 (TEMPLATE: 7r53 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(TLR3_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [737 aa]	Toll-like receptor 8 :TLR8_HUMAN
2	b		O 1 (A)	non-polymer(I5N)	5-cyclopropyl-6-(2,6-dimethylpyridin-4-yl)-~{N}-[(3~{R},4~{R})-3-fluoranylpiperidin-4-yl]-1~{H}-indazol-3-amine	368P(F) 369G(F) 391T(S) 393L(A) 444G(Y) (identity: 0.0 %/30.4 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:7r53_A_1 identity=30.4%

queryA       360:LNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTG-----QEWRG: 454
                :*    * *  *  * *  *     * **        *    *    *     * ** *        *   *  ******  *       *          :
7r53_A_1     460:LDLSLNSIFFIGPNQFENLPDIACLNLSAN-SNAQVLSGTEFSAIPH--VKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQN: 556
SecStr          :EE TTSS SS  TTSSTT   EEEEE TTS-    B  S TTSSSTT-- SEEE  SS  B  STTTTTT TT  EEE TT   SS  TTTSS  GGGGG:    
ExpBur          :bbbbebebeebbeebbeebbebbbbbbbeb-ebbbebebebbeebee--bebbbbbebebbbbeeebbbbbeebbbbbbbebebeeeeeeebbebebbee:    
Contact         :        bb                     b b                                                  b               

queryA       455:LENIFEIYLSYNKYLQLTRNSFALVPSLQRLML---RRVALKNVDSSP--SPFQPLRNLTILDLSNNNIANI-NDDMLEGLEKLEILDLQHNNLARL-WK: 547
                :  *     ** *    **        **  *     *   * * *     * *  * *** **** *    * *   *     *  *    * *    * :
7r53_A_1     557:FTNLKVLNLSHNNIYTLTXXXXLESKSLVELVFSGNRLDILWNDDDNRYISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWT: 656
SecStr          : SS  EEE TTS      ---- B SS  EEE TTS HHHHS SS  TTTTSSTB TT  EEE  SS  S   HHHHHTS TT SEEE  SS  S   GG:    
ExpBur          :beebeebebbebebeebe----bebebbeebbbbebbbeebbeeeeeebbebbeebeebeebbbbebebeebeeebbebbbebbeebbbbebebeebebe:    

queryA       548:HANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVF-GPAFRNLTELDMRFNP: 646
                :          *     *  * *  *               *    *  *    **        *** * *  **     *          *  *    **:
7r53_A_1     657:---------LLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSGFLSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNP: 747
SecStr          :---------GGGG TT  EEE  SS      S GGGT S   EEE  SS      TTHHHH TT  EEE TTS      TTTT  SS     EEE TT  :    
ExpBur          :---------bbeebeebebbbbeebebeebbeebeebbebbbebbbbebebeebbebbbbebeebbbbbbbebebeebeeebbeeeeeeebeebbbbebe:    

queryA       647:FDCTCESIAWFVNWINE-THTNIPELSSHYLCNTPPHYHG: 685
                :* ***  *  *  *  *     ** *     *  *    *:
7r53_A_1     748:FECTCD-IGDFRRWMDEHLNVKIPRLVD-VICASPGDQRG: 785
SecStr          :EE SGG-GHHHHHHHHH TTSB   GGG- BEEESTTTBT:    
ExpBur          :bebeee-beebbebbeebeebebeebbe-bebeeeeebee:

Protein Model on 7r53_A_1_O_1 (TEMPLATE: 7r53 )

Input Residue Numbers for Focused Sites