[pdbjlvh2]Protein Model on 7das_A_1_B

Protein Model on 7das_A_1_B_1 (TEMPLATE: 7das )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(TLR3_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [674 aa]	Toll-like receptor 3 :TLR3_MOUSE
2	b		B 1 (B)	polymer(polypeptide(L)) [671 aa]	Toll-like receptor 3 :TLR3_MOUSE	672S 673S(T) 685G 686F 687P 690L (identity: 83.3 %/78.3 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:7das_A_1 identity=78.3%

queryA        26:TKCTVSHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNL: 125
                :  ***   **********  ***** ****************  ********  ** *** ********** ** ************* ** ** *****:
7das_A_1      13:SQCTVRYNVADCSHLKLTHIPDDLPSNITVLNLTHNQLRRLPPTNFTRYSQLAILDAGFNSISKLEPELCQILPLLKVLNLQHNELSQISDQTFVFCTNL: 112
SecStr          :SS  B SSEEE  SS   S    S TT  EEE  S       TTTTTT TT  EEE  SS      HHHHHHSTT  EEE TT       TTTTSS  S :    
ExpBur          :eebeeeeeebebbebebeebbeebeeebebbebbebebeebebeebeebeebeebbbbebebeebeeebbeebeebebbbbeebebeebeeebbeebeeb:    

queryA       126:TELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFG: 225
                :*** ****** *** ***  ***** *************** ***********  *** ** ****    **** ** ****  ********  ** ** :
7das_A_1     113:TELDLMSNSIHKIKSNPFKNQKNLIKLDLSHNGLSSTKLGTGVQLENLQELLLAKNKILALRSEELEFLGNSSLRKLDLSSNPLKEFSPGCFQTIGKLFA: 212
SecStr          : EEE TTS      S TTTT SS  EEE TTS  S     SSS  TT  EEE  S    EE SSTTGGGTT EES EE TT    EE TTTTTTSSEE E:    
ExpBur          :eebbbebbebeebeeebbeebeebebbbbbebbbeebebbeeebbeebeebbbbebebebbeeebbebbeebebeebbbbebebeebbeebbeebeebbb:    

queryA       226:LFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVR: 325
                :* *** ** * ****** ** **** **** * **  **  ** ******** ********  *** **  ** * *  ******* *   *  ** * *:
7das_A_1     213:LLLNNAQLNPHLTEKLCWELSNTSIQNLSLANNQLLATSESTFSGLKWTNLTQLDLSYNNLHDVGNGSFSYLPSLRYLSLEYNNIQRLSPRSFYGLSNLR: 312
SecStr          :EE TT    HHHHHHHHHHH SS   EEE  SS   B  TTTTGGGGGS   EEE  SS   B  TTTTTT TT  EEE  S  B EE TTTTTT TT  :    
ExpBur          :bbbeebebeeebbeebbeebbebebeebbbbebebeebeeebbbbbeebebeebebbebebeebbebbbeebeebeebbbeebebeebeeebbeebeebe:    

queryA       326:YLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESD: 425
                :** *** *****   ** * ********** ** *** ** **  *** ****  *******  **** ***************  ****** ****   :
7das_A_1     313:YLSLKRAFTKQSXXXASHPNIDDFSFQWLKYLEYLNMDDNNIPSTKSNTFTGLVSLKYLSLSKTFTSLQTLTNETFVSLAHSPLLTLNLTKNHISKIANG: 412
SecStr          : EE TT B    ---    EE TTTTSS TT  EEE  S  B    SSTTTT TT  EEE TT BSS   B TTTTGGGTT    EEE  SS    B TT:    
ExpBur          :ebbbeebbbeee---eeebbbeeebbeebeebeebbbbebbbeebeeebbeebeebeebbbbebbeebeebeeebbebbeebebebbebbebebeebeeb:    

queryA       426:AFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDM: 525
                : ***** *  ******** * * ******* ***************   ********************** ***** ******************* * :
7das_A_1     413:TFSWLGQLRILDLGLNEIEQKLSGQEWRGLRNIFEIYLSYNKYLQLSTSSFALVPSLQRLMLRRVALKNVDISPSPFRPLRNLTILDLSNNNIANINEDL: 512
SecStr          :TTSS TT  EEE  SS  EEE  SGGGTT TT  EEE  S SEEE  TTSSTT TT  EEE TTS  B    SS TTTT TT       SS  S   TTT:    
ExpBur          :bbeebbebeebbbbebebebebebebbeebeebbbbebbebeebebbeebbeebeebeebbbeebebeebebeebbbebbeebbbbbbbbbebeebeeeb:    

queryA       526:LEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSV: 625
                :***** ***** ********** ******  ***************** ***** *** ***** * ******* *    *  * ** ************:
7das_A_1     513:LEGLENLEILDFQHNNLARLWKRANPGGPVNFLKGLSHLHILNLESNGLDEIPVGVFKNLFELKSINLGLNNLNKLEPFIFDDQTSLRSLNLQKNLITSV: 612
SecStr          :TTT TT  EEE  S   GGGS SS SSS    SSS TT  EEE  SS      TTTTTT TT  EEE  SS      TTTTTT  S  EEE  SS     :    
ExpBur          :beebeebeebebbebebbebbeeeeeeeebebbeebeebeebbbbebebebbbeebbeebeebeebbbbebebeebeeebbeebeebeebbbbebebeeb:    

queryA       626:EKKVFGPAFRNLTELDMRFNPFDCTCESIAWFVNWINETHTNIPELSSHYLCNTPPHYHGFPVRLFDTSSCK: 697
                :** **** * **  *************** ******* ***** *** ******* ** ***  ********:
7das_A_1     613:EKDVFGPPFQNLNSLDMRFNPFDCTCESISWFVNWINQTHTNISELSTHYLCNTPHHYYGFPLKLFDTSSCK: 684
SecStr          : HHHHHHHHTS SEEE  S   B SHHHHHHHHHHHHH   EETTTTTS B  BSSTTTT BGGG   SS  :    
ExpBur          :eeebbbbbbeebeebbbbebebebebebbbebbebbeeeebebeeeeeebebeeeeeeeeeebeebeeeeee:    
Contact         :                                              bb           bbb  b

Protein Model on 7das_A_1_B_1 (TEMPLATE: 7das )

Input Residue Numbers for Focused Sites