[pdbjlvh2]Protein Model on 7b1b_D_1_K

Protein Model on 7b1b_D_1_K_1 (TEMPLATE: 7b1b )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(TLR3_HUMAN)	D 1 (B)	polymer(polypeptide(L)) [752 aa]	Toll-like receptor :A0A6I8TEX2_AEDAE
2	b		K 1 (K)	branched(oligosaccharide)	beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose	611S(N) 633A(Y) 635R (identity: 33.3 %/31.4 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:7b1b_D_1 identity=31.4%

queryA       274:TNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSN: 373
                : *** * * ** **      *  *  **   * ** *  *   *  **   * ***                 *   *  ** *  *    *        :
7b1b_D_1     166:SNLTYLGLVYNGLNEIQPGLFDGLESLEALSLSYNDIKSLSAGSFNGLSSLRMLNLR---------VNKIESFDANTFASLKELSRLEITLNPFVSLPRG: 256
SecStr          :TT  EEE TTS      TTSSTT SS  B B  SB   B  TTTT S SS  EEEES---------SB   B  HHHHHS TT  EEEEES    B  TT:    
ExpBur          :eebeebbbbebbbeebeebbbebbeebeebbbbebebeebeebbbebbeebeebbbe---------ebebeebebebbeebebbeebbbbebebeebeeb:    

queryA       374:MFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLG---LNEIGQELTGQEWRGLENIFEIYLSYNKYLQ: 470
                : *     ** * * *    * **  *    *    *   **  *          *       * **   **    **                     * :
7b1b_D_1     257:LFSENKKLKTLILTNN-RKLVTLPEELLANLKE--LTVVNLSHNGVGNLPESLLSGSSGIIELNLGYNRLNSLPEELLSDQPQL------------QVLN: 341
SecStr          :SSTT S   EEEEES -SS  B  TTTT S TT--  EEE TT       SSSSTT     EEE  S       STTSTT S  ------------ EEE:    
ExpBur          :bbeebeebebbbbbeb-eebeebbeebbbebee--beebebbebbbeeebebbbebbebbeebbbbebebeebeeebbeebeeb------------ebbb:    

queryA       471:LTRNSFALVPS--------LQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLA---------RLWKHANPGG: 553
                :*  *     *         ** * *    *     *   *  * **  * * **    *      *  ***    * * **          *    *   :
7b1b_D_1     342:LDHNQLESIPDYFLERNVELQTLYLSHNRLRSL--SEKAFTKLKNLKELHLENNQLQTIPQFLFSGTPKLEEIYMQNNQLALHANSFINEELSIADNDNT: 439
SecStr          :  S       STTGGG S   EEE TT      -- GGGGTT       B TT       TTSSTT TT  EEB  S SS    S SS STT  TTS   :    
ExpBur          :bbebebeebeeebbeebebbebbebbebebeee--eeebbeebeebeebbbbbbbbeebbeebbeebeebebbbbbebebebebbeeeeeeeeeeebbbb:    

queryA       554:PIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSV---EKKVFGPAFRNLTELDMRFNPFDCT: 650
                :*   *  *  **  *   *    *         *    **  * *  *       *     ***  * *  *         *  *     *   **  * :
7b1b_D_1     440:PFQVLQKLRILHLRN---NSISTIFQDWYINNLEMQSLDLSFNKLPGLSYTQLQFQSNI-TLNLSNNEISQVLLIDDLDLQPYQR--INVDLNHNPLNCN: 533
SecStr          :GGGT TT  EEE SS---S   S  GGGGTT TT  EEE TTS   EEEGGG    S  -EEE TTS   EEE  SS    TT  --EEEE  S  B  S:    
ExpBur          :bbeebeebebbbbee---bebeebbebbbeebeebeebbbbebebebbeeeeeebeeeb-ebbbbebebeebebeeeeeebeebb--bebebbebebebb:    
Contact         :                                                         b                        b b               

queryA       651:CESIAWFVNWINETHTNIPELSSHYL-CNTPPH: 682
                :*     *   *              * *  ** :
7b1b_D_1     534:CNALK-FIQLIQSKAEHGLQFNVDQLRCSEPPN: 565
SecStr          :TTTHH-HHHHHTT  S SEEEE TT  B S ST:    
ExpBur          :bebeb-bbeeebeeeeeebeeebeebbbeeeee:

Protein Model on 7b1b_D_1_K_1 (TEMPLATE: 7b1b )

Input Residue Numbers for Focused Sites