Protein Model on 5zsl_A_1_U_1
(TEMPLATE: 
5zsl
)Protein Model on 5zsl_A_1_U_1
(TEMPLATE: 5zsl
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(TLR3_HUMAN) | A 1 (B) | polymer(polypeptide(L)) [777 aa] | Toll-like receptor 7 :B3Y653_MACMU | |
| 2 | b | U 1 (B) | non-polymer(9K9) | 2-amino-9-[(2S,3aR,4R,6R,6aR)-2-hydroxy-6-(hydroxymethyl)-2-oxotetrahydro-2H-2lambda~5~-furo[3,4-d][1,3,2]dioxaphosphol-4-yl]-3,9-dihydro-6H-purin-6-one | 96Q(Y) 197S(F) 199L 200K(Q) 202L(Y) 227F(V) 249S(F) 285N(K) (identity: 12.5 %/31.4 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:5zsl_A_1 identity=31.4% |
queryA 28:CTVSHEVADCSHLKLTQ-------------VPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQL: 114
:* ** * ** ** ** * * * * * ** ** * * * * * * :
5zsl_A_1 167:CYVSYSIEKDAFLNLTKLKVLSLKDNNVTTVPTVLPSTLTELYLYNNMIAEIQEDDFNNLNQLQILDLSGNC-----PR-CYNAP-FPCTPCKNNSPLQI: 259
SecStr : SS EE TTTTTT TT EEE SS S S TT SEEE SS B TTTTTT TT EEE SSS----- - TT S-S GGG B :
ExpBur :beeebeeeeebbeebeebebbbbbbbebeebbeebbeebbebbbbbbebeebeeebbeebeebebbbbbbbb-----bb-eeeee-beeeeeeeeeebeb:
Contact : b
queryA 115:SDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSP: 214
: * * * * * *** * * ** **** * * * * * * ** * * * * ** :
5zsl_A_1 260:PVNAFDALTELKVLRLHSNSLQHVPPRWFKNINNLQELDLSQNFLAK-EIGDAKFLHFLPNLI------------QLDLSFNFELQVYRASMNLSQAFSS: 346
SecStr : TTTTTT TT EEE SS S GGGGTT EEE SSS HH-HHTT GGGGG TT ------------EEE S TT BSS GGGGG:
ExpBur :eeebbeebeebebbbbbbbbbeebeeebbeebeebeebbbbbbebbe-bbeebebbeebeebe------------ebbbbbbbeeeeeeeebebbebbee:
Contact : b bb b
queryA 215:GCFHAIGRLFGLF---LNNVQLGP--SLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNN: 309
: * * * * ** * * * * * ** * *** * :
5zsl_A_1 347:LKSLKILRIRGYVFKELKSFQLSPLHNLQNLEVLDLGTNFIKIANLS------------MFKQFKRLKVIDLSVNKISPXXXXXXXXXXXXXXXXXXXXX: 434
SecStr : TT EEE S BSEE GGGGGGGTT TT EEE SS EE GG------------GGGGGTT SEEE S ---------------------:
ExpBur :bebbebbbbbbbbbeebeeebbebbeebeebebbbbbbbebeebebb------------bbeebeebebbbbbebebee---------------------:
Contact : b b b
queryA 310:IQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPL: 409
: * * * ** ** * * * * *** * * ** * ** * ** * ** *:
5zsl_A_1 435:PQ-----VLEQLYYFRYDKYARSCRFKXXXXXXX----XXXXSCYKYGQTLDLSKNSIFFIKSSDFQHLSFLKCLNLSGNLIS-QTLNGSEFQPLAE--L: 522
SecStr : ----- SSSSS S TT SS --------------- GGGS EEE SS GGGGTT TT SEEE TTS -S S SSTT TT-- :
ExpBur :ee-----eeeeeebeebbeeeeeeeee---------------ebbebeebbbbbebebeebeeeebeebebbbbbbbbebebe-bebebebbeebee--b:
queryA 410:HILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLT: 509
: * * * ** * ***** * * * * * * ** ** * ** * :
5zsl_A_1 523:RYLDFSNNRLDLLHSTAFEELRKLEVLDISSNS--------HYFQSEGITHM-LNFTKNLKV----------LQKLMMNDNDISSSTSRTMESESLRTLE: 603
SecStr : EEE SS TTTTTT TT EEE S --------GGGGSTT -GGGGGG TT---------- EEE TT SSS EESS EEE:
ExpBur :ebbbbbebebbbeeeebbebbeebebbbbbebe--------eebeeeeeebb-bebbeebee----------beebbbbebebeebebeebebebbebbb:
queryA 510:I----LDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASV: 605
: ** * * *** ** * * * * * * * * ** * * * ** * * * * :
5zsl_A_1 604:FRGNHLDVLWRDGDNRYLQLFKNLLKLEELDISKNSLSFLPSGVFDGMP-------PNLKNLSLAKNGLKSFIWEKLRYLKNLETLDLSHNQLTTVPERL: 696
SecStr : SS HHHHT TT TTTTTTTEETT EEE SS SS TTTTTTS -------TT EEE SS GGGGGG TT EEE SS S G:
ExpBur :bebbebeebbeeeeeebbebbeebeebeebbbbebebeebbeebbebbb-------eebeebbbbebebeebebeebeebeebebbebbebebeebbeeb:
queryA 606:FNNQVSLKSLNLQKNLITSVEKKVFGPAFR-------------------------NLTELDMRFNPFDCTCESIAWFVNWINETHTNIPELSSHYLCNTP: 680
: * *** * * * * * * ** ** * * * *** *** * * ** * * *:
5zsl_A_1 697:SNCSRSLKNLILKNNQIRSLTKYFLQDAFQLRYLDLSSNKIQMIQKTSFPENVLNNLKMLLLHHNRFLCTCDAV-WFVWWVQHTEVTIPYLATDVTCVGP: 795
SecStr :GGT SS EEE SS TTTTTT TT EEE SS GGGS HHHHTT SEEE S EE SGGGH-HHHHHHHH S TTTTTS BEEES:
ExpBur :bebbeebeebbbeebebeebbeebbeebeebeebbbbebbbeebeeebbeeebbeebeebbbbebebebeeebe-bbbebbbbbebebeeeeeebebebe:
queryA 681:PHYHGFPVRLFDTSSCK: 697
: * * * * :
5zsl_A_1 796:GAHKGQSVISLDLYTCE: 812
SecStr :GGGTT BSTT GGGG:
ExpBur :eeeeeeebbebebeeee:
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[assembly_id:1]
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