Protein Model on 5zln_A_1_H_1 (TEMPLATE: 5zln )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(TLR3_HUMAN) A 1 (A) polymer(polypeptide(L)) [751 aa] Toll-like receptor 9 :TLR9_MOUSE
2 b H 1 (H) branched(oligosaccharide) beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose 248T(S) 249S(H) 275N (identity: 33.3 %/30.3 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:5zln_A_1 identity=30.3%
queryA        32:HEVADCSHLKLTQVPD----DLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISK------------LEPELCQKLPMLKVLNLQHNELSQ--: 113
                :*   **  * *  **         *** * *  *    *    *   * *  *    *                 **        *  ***  *      :
5zln_A_1      15:HGLVDCNWLFLKSVPRFSAAASCSNITRLSLISNRIHHLHNSDFVHLSNLRQLNLKWNCPPTGLSPLHFSCHMTIEPRTFLAMRTLEELNLSYNGITTVP: 114
SecStr          :SSEEE TTS  SS    TT S  TT  EEE TT    EE TTTTGGGTT SEEE TTSB  GGGSTT      EE TTTTTT TT  EEE  SB  SS  :    
ExpBur          :eeebebeeeebeebbebeebeebeebeebbbbbbebeebeeebbeebeebeebebeebbbbeebbeeeeebebeeeeebbbebeebeebebbebbbeebb:    

queryA       114:------------------LSDKTFAFCTNLTELHLMSNSIQK------IKNNP--FVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALK: 187
                :                  *     *    *  *    *   *       *  *       **  * *  * *  **   *     *  ** * * *  * :
5zln_A_1     115:RLPSSLVNLSLSHTNILVLDANSLAGLYSLRVLFMDGNCYYKNPCTGAVKVTPGALLGLSNLTHLSLKYNNL--TKVPRQLP-PSLEYLLVSYNLIVKLG: 211
SecStr          :   TT  EEE TTSS  EE TTTTTT TT  EEE   SSBTTB  SS  EE TTTTTT TT  EEE  SS  --SS  SS  -TT SEEE  SS   EE :    
ExpBur          :ebbeebeebbbbbbebeebeeebbeebeebebbebbbbbbeebeeeeebebeebbbeebeebbebbbeebbb--eebbeebb-eebeebbbbbbebeebb:    

queryA       188:SEELDIFAN-SSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNL: 286
                : * *   **  **  *    *        * **             * *     *           * *  * * *     * **   *   **** * *:
5zln_A_1     212:PEDL---ANLTSLRVLDVGGNCRR-----CDHAPNPCIECGQKSLHLHPETFHHL------SHLEGLVLKDSSLHTLNSSWFQGL--VNMSVLDLSENFL: 295
SecStr          :GGGG---TT TT SEEE TTSS  -----GGG SS     SSSS EE TTTTTT ------TT  EEE  SS      GGGGTT --TT  EEE TTSS :    
ExpBur          :eebb---eebeebeebbbbbbbbb-----eeeeeeeeeebeeeebebeeebbeeb------eebebbbbebbbbeebeebbbeeb--eebbebbbbbbbb:    
Contact         :                                                             bb                         b           

queryA       287:--NVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLH------GLFNVRYLNLK----RSFTKQSIS-LASLPKIDDFSFQW-------------LKCLEHL: 360
                :         *  *  *    *  *         **       *     **      **  *     ** ***      *                 *   :
5zln_A_1     296:YESIQHTNAFQNLTRLRKLNLSFNYRKKVSFARLHLASSFKNLVSLQELNMNGIFFRSLNKYTLRWLADLPKLHTLHLQMNFINQAQLSIFGTFRALRFV: 395
SecStr          :TTHHHH  TTTT TT  EEE TT   TT  BS     GGGGG TT  EEE TTS BSEE TTTSGGGTT TT  EEE  SS   EE GGGGGS SS  EE:    
ExpBur          :bebbeebebbeebeebeebebbbbbeeeeebeebebbebbeebeebeebbbbbbbbeebeeebbeebbebeebbbbbbbebebeebebbbbeebeebeeb:    

queryA       361:NMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTN------ETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRG: 454
                :   ** * *                                     *            *  *    *    *  *  *  * *  * * *   *     :
5zln_A_1     396:DLSDNRISGPSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNFMDRCKNFKFTMDLSRNNLVTIKPEMFVQLSRLQCLSLSHNSIAQAVQGSQFLP: 495
SecStr          :E  SS   SS  --------------------------------  GGGGGTT S EEE  SS  SS  GGGGTT TT SEEE TTS       S SSTT:    
ExpBur          :bbbebebebeee--------------------------------eebbeebeeeebbbbbbebebeebeeebbeebeebbbbbbbebebebebebebbee:    

queryA       455:LENIFEIYLSYNKYLQLTRNSFALVPSLQRLML----RRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHAN: 550
                :* *     ** **       **   * ** * *         *      *    *  *  * *  * *       *        **   *   * *    :
5zln_A_1     496:LTNLQVLDLSHNKLDLYHWKSFSELPQLQALDLSYNSQPFSMKGIGHNFSFVAHLSMLHSLSLAHNDIHTRVSSHLNS-NSVRFLDFSGNGMGRMWDEG-: 593
SecStr          : TT  EEE  SS      TTTTTT TT  EEE TT  GGGG TT     GGGGG TT  EEE TTS   SSS S  EE-SS  EEE  SS HHHHTTST-:    
ExpBur          :beebebbbbbebebebeeeebbebbeebebbbbbebeebbeeeeeebebebbeebeebebbbbbbbebbbebbeebeb-ebbeebbbbebbbeebbeee-:    

queryA       551:PGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKD-------------------------LFELKIIDLGLNNL-----NTLP------------------: 602
                : *    *  *** *  * *  *                                     *  *   **  * *      ***                  :
5zln_A_1     594:-GLYLHFFQGLSGLLKLDLSQNNLHILRPQNLDNLPKSLKLLSLRDNYLSFFQWTSLSFLPNLEVLDLAGNQLKALTNGTLPNGTLLQKLDVSSNSIVSV: 692
SecStr          :-TTTTTTTTEETT  EEE  SS  S   HHHHHTS TT  EEE TTS      GGGGGG TT  EEE TTS   SB SS S TT    EEE  SS    B:    
ExpBur          :-eebbebbeebeebeebbbbebebeebeeebbebbbeebeebbbeebebeebebebbeebeebeebbbbebebebbeeeebbeebebeebbbbebebeeb:    

queryA       603:-ASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCESIAWFVNWINETHTNIPELSSHYLCNTPPHYHGFPVRLFDTSSC: 696
                :    *   * **  **  *    *    ***   *** ** * **  * *   * **    *  *  * *     *  *    *      *   *:
5zln_A_1     693:VPAFFALAVELKEVNLSHNILKTVDRSWFGPIVMNLTVLDVRSNPLHCACG--AAFVDLLLEVQTKVPGLANGVKCGSPGQLQGRSIFAQDLRLC: 785
SecStr          : TTTTTT TT  EEE  SS  S   GGGTGGGGGG SEEE  S  EE  TT-- THHHHHHHTGGGSTTHHHHSBEEESGGGBTSBTTSS SS  :    
ExpBur          :eeebbeebeebeebebbebebeebeeebbeebbeebeebbbeebebebeee--bebbebbbebeeebebbbeebebeeeeebeeebbbeeebeee:

Input Residue Numbers for Focused Sites

ex) 2,15,123