Protein Model on 5zln_A_1_B_1
(TEMPLATE: 
5zln
)Protein Model on 5zln_A_1_B_1
(TEMPLATE: 5zln
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(TLR3_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [751 aa] | Toll-like receptor 9 :TLR9_MOUSE | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [753 aa] | Toll-like receptor 9 :TLR9_MOUSE | 136Q(Y) 137K 218H 220I(P) 221G(N) 222R(P) 307Y(F) 353W(M) 364D 416K(R) 418K(N) 420S(V) 440L(H) 441N 442E(S) 444G(A) 467K 471L(Y) 488R(Q) 492L(M) 493K 494N(G) 495V(I) 520N(T) 521I(R) 547K(D) 548H(E) 549A(G) 553G(L) 576E(I) 578P(R) 580E(Q) 678N(G) (identity: 18.2 %/30.3 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:5zln_A_1 identity=30.3% |
queryA 32:HEVADCSHLKLTQVPD----DLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISK------------LEPELCQKLPMLKVLNLQHNELSQ--: 113
:* ** * * ** *** * * * * * * * * * ** * *** * :
5zln_A_1 15:HGLVDCNWLFLKSVPRFSAAASCSNITRLSLISNRIHHLHNSDFVHLSNLRQLNLKWNCPPTGLSPLHFSCHMTIEPRTFLAMRTLEELNLSYNGITTVP: 114
SecStr :SSEEE TTS SS TT S TT EEE TT EE TTTTGGGTT SEEE TTSB GGGSTT EE TTTTTT TT EEE SB SS :
ExpBur :eeebebeeeebeebbebeebeebeebeebbbbbbebeebeeebbeebeebeebebeebbbbeebbeeeeebebeeeeebbbebeebeebebbebbbeebb:
Contact : bbb
queryA 114:------------------LSDKTFAFCTNLTELHLMSNSIQK------IKNNP--FVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALK: 187
: * * * * * * * * ** * * * * ** * * ** * * * * :
5zln_A_1 115:RLPSSLVNLSLSHTNILVLDANSLAGLYSLRVLFMDGNCYYKNPCTGAVKVTPGALLGLSNLTHLSLKYNNL--TKVPRQLP-PSLEYLLVSYNLIVKLG: 211
SecStr : TT EEE TTSS EE TTTTTT TT EEE SSBTTB SS EE TTTTTT TT EEE SS --SS SS -TT SEEE SS EE :
ExpBur :ebbeebeebbbbbbebeebeeebbeebeebebbebbbbbbeebeeeeebebeebbbeebeebbebbbeebbb--eebbeebb-eebeebbbbbbebeebb:
Contact : bb
queryA 188:SEELDIFAN-SSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNL: 286
: * * ** ** * * * ** * * * * * * * * * ** * **** * *:
5zln_A_1 212:PEDL---ANLTSLRVLDVGGNCRR-----CDHAPNPCIECGQKSLHLHPETFHHL------SHLEGLVLKDSSLHTLNSSWFQGL--VNMSVLDLSENFL: 295
SecStr :GGGG---TT TT SEEE TTSS -----GGG SS SSSS EE TTTTTT ------TT EEE SS GGGGTT --TT EEE TTSS :
ExpBur :eebb---eebeebeebbbbbbbbb-----eeeeeeeeeebeeeebebeeebbeeb------eebebbbbebbbbeebeebbbeeb--eebbebbbbbbbb:
Contact : b bbb
queryA 287:--NVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLH------GLFNVRYLNLK----RSFTKQSIS-LASLPKIDDFSFQW-------------LKCLEHL: 360
: * * * * * ** * ** ** * ** *** * * :
5zln_A_1 296:YESIQHTNAFQNLTRLRKLNLSFNYRKKVSFARLHLASSFKNLVSLQELNMNGIFFRSLNKYTLRWLADLPKLHTLHLQMNFINQAQLSIFGTFRALRFV: 395
SecStr :TTHHHH TTTT TT EEE TT TT BS GGGGG TT EEE TTS BSEE TTTSGGGTT TT EEE SS EE GGGGGS SS EE:
ExpBur :bebbeebebbeebeebeebebbbbbeeeeebeebebbebbeebeebeebbbbbbbbeebeeebbeebbebeebbbbbbbebebeebebbbbeebeebeeb:
Contact : b b b
queryA 361:NMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTN------ETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRG: 454
: ** * * * * * * * * * * * * * * * :
5zln_A_1 396:DLSDNRISGPSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNFMDRCKNFKFTMDLSRNNLVTIKPEMFVQLSRLQCLSLSHNSIAQAVQGSQFLP: 495
SecStr :E SS SS -------------------------------- GGGGGTT S EEE SS SS GGGGTT TT SEEE TTS S SSTT:
ExpBur :bbbebebebeee--------------------------------eebbeebeeeebbbbbbebebeebeeebbeebeebbbbbbbebebebebebebbee:
Contact : b b b b bbb b
queryA 455:LENIFEIYLSYNKYLQLTRNSFALVPSLQRLML----RRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHAN: 550
:* * ** ** ** * ** * * * * * * * * * * * ** * * * :
5zln_A_1 496:LTNLQVLDLSHNKLDLYHWKSFSELPQLQALDLSYNSQPFSMKGIGHNFSFVAHLSMLHSLSLAHNDIHTRVSSHLNS-NSVRFLDFSGNGMGRMWDEG-: 593
SecStr : TT EEE SS TTTTTT TT EEE TT GGGG TT GGGGG TT EEE TTS SSS S EE-SS EEE SS HHHHTTST-:
ExpBur :beebebbbbbebebebeeeebbebbeebebbbbbebeebbeeeeeebebebbeebeebebbbbbbbebbbebbeebeb-ebbeebbbbebbbeebbeee-:
Contact : b b b bbbb bb bbb
queryA 551:PGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKD-------------------------LFELKIIDLGLNNL-----NTLP------------------: 602
: * * *** * * * * * * ** * * *** :
5zln_A_1 594:-GLYLHFFQGLSGLLKLDLSQNNLHILRPQNLDNLPKSLKLLSLRDNYLSFFQWTSLSFLPNLEVLDLAGNQLKALTNGTLPNGTLLQKLDVSSNSIVSV: 692
SecStr :-TTTTTTTTEETT EEE SS S HHHHHTS TT EEE TTS GGGGGG TT EEE TTS SB SS S TT EEE SS B:
ExpBur :-eebbebbeebeebeebbbbebebeebeeebbebbbeebeebbbeebebeebebebbeebeebeebbbbebebebbeeeebbeebebeebbbbebebeeb:
Contact : b b b b b b
queryA 603:-ASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCESIAWFVNWINETHTNIPELSSHYLCNTPPHYHGFPVRLFDTSSC: 696
: * * ** ** * * *** *** ** * ** * * * ** * * * * * * * * *:
5zln_A_1 693:VPAFFALAVELKEVNLSHNILKTVDRSWFGPIVMNLTVLDVRSNPLHCACG--AAFVDLLLEVQTKVPGLANGVKCGSPGQLQGRSIFAQDLRLC: 785
SecStr : TTTTTT TT EEE SS S GGGTGGGGGG SEEE S EE TT-- THHHHHHHTGGGSTTHHHHSBEEESGGGBTSBTTSS SS :
ExpBur :eeebbeebeebeebebbebebeebeeebbeebbeebeebbbeebebebeee--bebbebbbebeeebebbbeebebeeeeebeeebbbeeebeee:
Contact : b
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[assembly_id:1]
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