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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(TLR3_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [750 aa] | Toll-like receptor 8 :TLR8_HUMAN | |
2 | b | M 1 (A) | non-polymer(CU8) | 7-(3-methylphenyl)pyrazolo[1,5-a]pyrimidine-3-carboxamide | 420S(F) 421K(F) 444G(A) 445Q 446E(V) (identity: 20.0 %/31.1 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:5wyx_A_1 identity=31.1% |
queryA 34:VADCSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTIS--------------KLEPELCQKLPMLKVLNLQHNELSQLSDKTF: 119 : * ** * ** * * * * * ** * * * * * * * * : 5wyx_A_1 24:IAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVXXXXXXXXXXXNGLNITDGAFLNLKNLRELLLEDNQLPQIPS---: 120 SecStr :EEE SS SS S TTEEEEE SS EE TTSSTT TT EEE TT S ----------- EE TTTTTT TT EEE SS SS S---: ExpBur :bbebeebebeebbeebeeebbebebbebebeebeeebbeebeebeebbbbebeee-----------ebbebeebbbeebeebeebbbbebebeebbb---: queryA 120:AFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLEN-----------------------------LQELLLSNNKIQALKSEE: 190 : **** * * * * ** * * * * * * * *** * * : 5wyx_A_1 121:GLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFN-KVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLSNTQIKYISEED: 219 SecStr :S TT SEEE SS EE TTTTTT TT SEEE SSS SS-S S EE TTTTTT TT EEE SS SS S TT EEE TTS EE TTT: ExpBur :bbbebbebbbbbebebeebeeebbbebeebeebbbbbbbeee-eebeebebeebbbeebeebebbbbbbbbbeebbeebbebbeebebbebebeebbeee: queryA 191:LDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNL--NV: 288 : * * * ** * * ** * * * * * * ** * * * *** * * : 5wyx_A_1 220:FKGLINLTL--LDLSGN-----CPRCFNAPFPCVP-----CDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMP--HLKVLDLEFNYLVGEI: 305 SecStr :TTT TT E--EE TTS-----S TT SS ----- STT EE TTTTTT TT EEE TTS S GGGGTT T--T EEE SS HHHH: ExpBur :beebeebbb--bbbbbb-----bbbbeeeeeeeee-----beeeeebebeeebbeebeebeebbbbbbbbeebeebbbeebe--ebebbbbbebebbebb: queryA 289:VGNDSFAWLPQLEYFFLEYNNI-----QHL-FSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFS-FQWLKCLEHLNMEDNDIPGIKSNMFTGLINL: 381 : ** ** * * * ** * * * * * * * *** * * * * * * * **: 5wyx_A_1 306:ASGAFLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHL-RGYVFQEL------REDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNL: 398 SecStr :HS GGGGG TT EEE TT TT SB GGGGG TT EEE -TT SEE------ GGGGGGGTT TT EEE TT EE GGGGGG TT : ExpBur :eebebbeebeebeebbbbbbeeeeeeeeebebbeebeebeebebbbb-bbbbbbeb------eeebbebbbebeebbbbbbbbbebeebebebbeebeeb: queryA 382:KYLSL---------------------------------------SNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNE: 442 : * ** * * * * * * * * * * * * : 5wyx_A_1 399:EIIYLSENRISPLVXXXXXXXXXXXXXXXXXXXXXXXXXXFDPHSNFYHFTRPLIKPQCAAYGKA----LDLSLNSIFFIGPNQFENLPDIACLNLSANS: 494 SecStr : EEE TT -------------------------- TTS SSS S SS HHHHTTS E----EE TTSS SS TTTTTT SEEE SS : ExpBur :ebbbbbebebebee--------------------------eeeeeeebbeeeeebeeebeeeeeb----bbbbebebeebbeebbeebbebbbbbbbebe: Contact : bb queryA 443:IGQELTGQEWRGLENIFEIYLSYNKYLQLTRN--SFALVPSLQRLMLRRV----------ALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDM-LEGL: 529 : * * * * *** ** * * * * * * * ** * ** *** * ** : 5wyx_A_1 495:NAQVLSGTEFSAIPHV--------KYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESK: 586 SecStr : B S TTTTSTT -------- EEE S B STTTTTT TT EEE TT TT S B GGGGG SS EEE TT BSS EES: ExpBur :bebebebebbeebeeb--------ebbbbbebebebeeeebbebbeebebbbbbebeeeeeeeeeebbbebbeebeebeebebbebebeebeeeeebebe: Contact : bbb queryA 530:EKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVF----KDLFELKIID---------------------------------: 592 : * * * ** * *** * * * * ** * * * ** * * : 5wyx_A_1 587:SLVELV-FSGNRLDILW-NDDDNRYISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDS: 684 SecStr :S EEE- SS HHHHH-T TT TTTTTTTEETT EEE SS S HHHHHTS TT SEEE SS S GGGGGG TT EEE SS S : ExpBur :bbeebb-bbbbebbebb-ebeeeebbebbeebeebeebbbbebebeebbeebbeebbebbbebbbbebebeebebebbeebeebebbbbeebebeebbeb: queryA 593:------------LGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVF-GPAFRNLTELDMRFNPFDCTCESIAWFVNWINE-THTNIPELSSHYLCN: 678 : * * ** *** * * ** * * * *** *** * * * * ** * * : 5wyx_A_1 685:LSDFTSSLRTLLLSHNRISHLPSGFLSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCD-IGDFRRWMDEHLNVKIPRLVD-VICA: 782 SecStr :GGGT SS EEE SS TTSS S EEE SS S TTTS SS EEE TT EE SST-THHHHHHHHT TTSB GGG- BEE: ExpBur :bbebbebbeebbbbebebeebbebbbbeeeebebbbbbebebeebeeebeeeeeebebeebbbbebebebeee-beebbebbeebeebebbebbb-bebe: queryA 679:TPPHYHG: 685 : * *: 5wyx_A_1 783:SPGDQRG: 789 SecStr :ETTTSTT: ExpBur :eeeebee: |