Protein Model on 5o0p_B_1_J_1 (TEMPLATE: 5o0p )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(TLR3_HUMAN) B 1 (B) polymer(polypeptide(L)) [294 aa] Reticulon-4 receptor :RTN4R_MOUSE
2 b J 1 (B) non-polymer(NA) SODIUM ION 494N(H) 520N(R) (identity: 0.0 %/39.9 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:5o0p_B_1 identity=39.9%
queryA       481:SLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVE: 580
                :* **  *       *      **  ****** *  *  * *      **  ** ***  *             *  *  ** *** * *   *  *    :
5o0p_B_1      35:SSQRIFLHGNRISHVPAAS--FQSCRNLTILWLHSNALARIDAAAFTGLTLLEQLDLSDNAQLHVVD------PTTF-HGLGHLHTLHLDRCGLRELGPG: 125
SecStr          :T SEEE TTS   EE TTT--TTT TT  EEE  SS   EE TTTTTT TT  EEE  S TT     ------TTTT-TT TT  EEE TTS      TT:    
ExpBur          :ebebbbbbebebeebeeee--beebeebbbbebeebebeebeeebbebbeebeebbbbebeebeebe------eebb-eebeebebbebeebbbeebbee:    
Contact         :             b                         b                                                            

queryA       581:VFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELD: 641
                : *  *  *    *  ***  **   *     *  * *  * * **       *** *  **:
5o0p_B_1     126:LFRGLAALQYLYLQDNNLQALPDNTFRDLGNLTHLFLHGNRIPSVPEH----AFRGLHSLD: 182
SecStr          :TTTT TT  EEE  SS      TTTTTT TT  EEE  SS    B TT----TTTT TT  :    
ExpBur          :bbeebebbeebbbbebebeebeeebbeebeebbbbbbbebebeebeee----bbebbebbe:    


Input Residue Numbers for Focused Sites

ex) 2,15,123