[pdbjlvh2]Protein Model on 5gs0_A_1_P

Protein Model on 5gs0_A_1_P_1 (TEMPLATE: 5gs0 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(TLR3_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [663 aa]	Toll-like receptor 3 :TLR3_HUMAN
2	b		P 1 (A)	non-polymer(NAG)	2-acetamido-2-deoxy-beta-D-glucopyranose	252N 278M 304F (identity: 100.0 %/100.0 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:5gs0_A_1 identity=100.0%

queryA        29:TVSHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTEL: 128
                :****************************************************************************************************:
5gs0_A_1       3:TVSHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTEL: 102
SecStr          :  BSSEEE  SS  SS  S S TT SEEE  SS      GGGGSS TT SEEE  SS      HHHHHT TT  EEE  SSS     TTSSTT  S SEE:    
ExpBur          :eeeeeebebbeeeeeebbeebeeebeebebbebebeebebeebeebeebeebebbebebeebeeebbeebeebebbbbeebebeebeeebbbebeebeeb:    

queryA       129:HLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFL: 228
                :****************************************************************************************************:
5gs0_A_1     103:HLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFL: 202
SecStr          :E  SS      S TTTT TT  EEE  SS   S    SS   TT  EEE  SS    B HHHHGGGTT EESEEE TT     B TTTTTTSSEE EEE :    
ExpBur          :bbbebebeebeebbbbebeebebbbbbebbbeebebbeeebbeebeebbbbebebebbeeebbebbeebebeebbbbebebeebbeebbebbeebebbbb:    

queryA       229:NNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLN: 328
                :****************************************************************************************************:
5gs0_A_1     203:NNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLN: 302
SecStr          : S    HHHHHHHHHHHTTS   EEE TT    EE TTTT GGGGS   EEE  SS   EE TTTTTT SS  EEE  S  B  B GGGGTT  S  EEE:    
ExpBur          :bebebbeebbeebbebbbebebeebbbbebebeebeeebbebbeebebbbbbbbebebeebeeebbbebbebeebebbebebeebeeebbebbeebeebb:    
Contact         :                       b                         b                         b                        

queryA       329:LKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFS: 428
                :****************************************************************************************************:
5gs0_A_1     303:LKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFS: 402
SecStr          : TT B   SSSSS S  B TTTTTT SS  EEE  S  B    TTTTTT TT  EEE TT BS   EE TTGGGGGTTS   EEE TTS   EE TTTTT:    
ExpBur          :beebbbeeeeeeeeebebeeebbebbebbeebbbeebebeebeeebbeebeebeebbbbebbeebeebeeebbebbeebebeebbbbebebeebeeebbe:    

queryA       429:WLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEG: 528
                :****************************************************************************************************:
5gs0_A_1     403:WLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEG: 502
SecStr          :T TT  EEE  SS  EEEE S TTTT SS  EEE  S SEEEE SSTTTT TT  EEE TTS  B    SS TTTT TT  EEE  SS      TTTTTT:    
ExpBur          :ebeebebbebbebebebebebebbeebeebeebebbebeebebeeebbeebeebeebbbeebebeebebeebbbeebeebbbbbbbebebeebeeebbeb:    

queryA       529:LEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKK: 628
                :****************************************************************************************************:
5gs0_A_1     503:LEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKK: 602
SecStr          : TT  EEE  S  TTGGGSTTSTTS   TTTT TT  EEE  SS      TTTTTT TT  EEE  SS      TTTTTT  S  EEE  SS      HH:    
ExpBur          :beebeebbbbebebbebbeeebeeebbebbeebeebeebbbbebebeebbeebbbebeebeebbbbebebeebeeebbeebeebebbbbbebebebbeee:    

queryA       629:VFGPAFRNLTELDMRFNPFDCTCESIAWFVNWINETHTNIPELSSHYLCNTPPHYHGFPVRLF: 691
                :***************************************************************:
5gs0_A_1     603:VFGPAFRNLTELDMRFNPFDCTCESIAWFVNWINETHTNIPELSSHYLCNTPPHYHGFPVRLF: 665
SecStr          :HHHHHHTS SEEE  S  EE SHHHHHHHHHHHHH  SB TTHHHH BEEESTT SS BTT  :    
ExpBur          :bbbebbeebeebbbbebebebeeebbeebbebbeeeebebeebeeebebeeeeeeeeeebeee:

Protein Model on 5gs0_A_1_P_1 (TEMPLATE: 5gs0 )

Input Residue Numbers for Focused Sites