Protein Model on 5gmg_A_1_J_1
(TEMPLATE: 
5gmg
)Protein Model on 5gmg_A_1_J_1
(TEMPLATE: 5gmg
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(TLR3_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [762 aa] | Toll-like receptor 7 :B3Y653_MACMU | |
| 2 | b | J 1 (B) | non-polymer(SDL) | 2-azanyl-9-[(2~{R},3~{R},4~{S},5~{R})-5-(hydroxymethyl)-3,4-bis(oxidanyl)oxolan-2-yl]-7-prop-2-enyl-1~{H}-purine-6,8-dione | 395T 420S(D) 422I(L) 457N(G) 458I 459F(T) (identity: 33.3 %/34.6 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:5gmg_A_1 identity=34.6% |
queryA 358:EHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLEN: 457
: * * * *** * * ** * ** * ** * ** * * * * ** * ***** * * :
5gmg_A_1 474:QTLDLSKNSIFFIKSSDFQHLSFLKCLNLSGNLIS-QTLNGSEFQPLAE--LRYLDFSNNRLDLLHSTAFEELRKLEVLDISSNS--------HYFQSEG: 562
SecStr :SEEE SS GGGGTT TT SEEE TT - S SSTT TT-- EEE SS TTTTTT TT EEE S --------GGGGSTT:
ExpBur :ebbbbbebebeebeeebbeebebbbbbbbbebebe-bebebebbeebee--bebbbbbebebbbeeeebbebbeebebbbbbebe--------eebeeee:
Contact : b b b b
queryA 458:IFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTI----LDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGG: 553
:* * * * ** ** * ** * ** * * *** ** * * * * :
5gmg_A_1 563:ITHM-LNFTKNLKV----------LQKLMMNDNDISSSTSRTMESESLRTLEFRGNHLDVLWRDGDNRYLQLFKNLLKLEELDISKNSLSFLPSGVFDGM: 651
SecStr : -TTTTSS TT---------- EEE TT SS BSS EEE SS HHHHT TT TTTTTTTTBTT EEE SS S TTTTTTS:
ExpBur :eebe-bebbeebee----------beebbbbebebeebebeebebebbebbbbebbebeebbeeeeeebbebbeebeebeebbbbebebeebbeebbebb:
Contact :bb
queryA 554:PIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFR------------------: 635
:* * * * ** * * * ** * * * * * *** * * * * * * ** :
5gmg_A_1 652:P-------PNLKNLSLAKNGLKSFIWEKLRYLKNLETLDLSHNQLTTVPERLSNCSRSLKNLILKNNQIRSLTKYFLQDAFQLRYLDLSSNKIQMIQKTS: 744
SecStr : -------TT EEE SS GGGGGG TT EEE SS S GGGT SS EEE SS S TTTTTT TT EEE SS TTT:
ExpBur :b-------eebeebbbbebebeebebeebeebeebebbebbebebeebbeebbebbeebeebbbeebebeebbeebbeebebbeebbbbebbbeebeeeb:
queryA 636:-------NLTELDMRFNPFDCTCESIAWFVNWINETHTNIPELSSHYLCNTPPHYHGFPVRLFDTSSC: 696
: ** * * * *** *** * * ** * * * * * * *:
5gmg_A_1 745:FPENVLNNLKMLLLHHNRFLCTCDAV-WFVWWVQHTEVTIPYLATDVTCVGPGAHKGQSVISLDLYTC: 811
SecStr :S HHHHTT SEEE SS EE SGGGH-HHHHHHHH SB TTTTTT BEEESGGGTT BTTT TT :
ExpBur :bbeebbeebeebbbbebebebeeebe-bbbebbbbbebebeeeeeebebebeeeeeeeebbebebeee:
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[assembly_id:1]
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