[pdbjlvh2]Protein Model on 5gmg_A_1_H

Protein Model on 5gmg_A_1_H_1 (TEMPLATE: 5gmg )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(TLR3_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [762 aa]	Toll-like receptor 7 :B3Y653_MACMU
2	b		H 1 (A)	non-polymer(NAG)	2-acetamido-2-deoxy-beta-D-glucopyranose	534I(E) 536D 566I(N) 568N(S) 590I(T) (identity: 20.0 %/34.6 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:5gmg_A_1 identity=34.6%

queryA       358:EHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLEN: 457
                :  *    * *  ***  *  *  ** * **    *  **    *  **   *  *    *      * **  *  *****   *              * :
5gmg_A_1     474:QTLDLSKNSIFFIKSSDFQHLSFLKCLNLSGNLIS-QTLNGSEFQPLAE--LRYLDFSNNRLDLLHSTAFEELRKLEVLDISSNS--------HYFQSEG: 562
SecStr          :SEEE  SS      GGGGTT TT SEEE TT    -    S SSTT TT--  EEE  SS      TTTTTT TT  EEE  S  --------GGGGSTT:    
ExpBur          :ebbbbbebebeebeeebbeebebbbbbbbbebebe-bebebebbeebee--bebbbbbebebbbeeeebbebbeebebbbbbebe--------eebeeee:    

queryA       458:IFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTI----LDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGG: 553
                :*    *   * *            ** **          *       ** *      **       *        * *** **   * *  *      * :
5gmg_A_1     563:ITHM-LNFTKNLKV----------LQKLMMNDNDISSSTSRTMESESLRTLEFRGNHLDVLWRDGDNRYLQLFKNLLKLEELDISKNSLSFLPSGVFDGM: 651
SecStr          :    -TTTTSS TT----------  EEE TT      SS    BSS  EEE  SS HHHHT TT  TTTTTTTTBTT  EEE  SS  S   TTTTTTS:    
ExpBur          :eebe-bebbeebee----------beebbbbebebeebebeebebebbebbbbebbebeebbeeeeeebbebbeebeebeebbbbebebeebbeebbebb:    
Contact         :                                                                                b b                 

queryA       554:PIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFR------------------: 635
                :*         *  * *  **      *    *  *   **  * * * *    *   *** * *  * * *  *     **                   :
5gmg_A_1     652:P-------PNLKNLSLAKNGLKSFIWEKLRYLKNLETLDLSHNQLTTVPERLSNCSRSLKNLILKNNQIRSLTKYFLQDAFQLRYLDLSSNKIQMIQKTS: 744
SecStr          : -------TT  EEE  SS      GGGGGG TT  EEE  SS      S GGGT SS  EEE  SS   S  TTTTTT TT  EEE  SS      TTT:    
ExpBur          :b-------eebeebbbbebebeebebeebeebeebebbebbebebeebbeebbebbeebeebbbeebebeebbeebbeebebbeebbbbebbbeebeeeb:    
Contact         :            b b                     b                                                               

queryA       636:-------NLTELDMRFNPFDCTCESIAWFVNWINETHTNIPELSSHYLCNTPPHYHGFPVRLFDTSSC: 696
                :       **  *    * * ***    *** *   *   ** *     *  *    *  *   *   *:
5gmg_A_1     745:FPENVLNNLKMLLLHHNRFLCTCDAV-WFVWWVQHTEVTIPYLATDVTCVGPGAHKGQSVISLDLYTC: 811
SecStr          :S HHHHTT SEEE  SS EE SGGGH-HHHHHHHH  SB TTTTTT BEEESGGGTT BTTT   TT :    
ExpBur          :bbeebbeebeebbbbebebebeeebe-bbbebbbbbebebeeeeeebebebeeeeeeeebbebebeee:

Protein Model on 5gmg_A_1_H_1 (TEMPLATE: 5gmg )

Input Residue Numbers for Focused Sites