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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(TLR3_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [776 aa] | Toll-like receptor 7 :B3Y653_MACMU | |
2 | b | O 1 (A) | non-polymer(CA) | CALCIUM ION | 692D (identity: 100.0 %/31.3 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:5gmf_A_1 identity=31.3% |
queryA 28:CTVSHEVADCSHLKLTQ-------------VPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQL: 114 :* ** * ** ** ** * * * * * ** ** * * * * * * : 5gmf_A_1 167:CYVSYSIEKDAFLNLTKLKVLSLKDNNVTTVPTVLPSTLTELYLYNNMIAEIQEDDFNNLNQLQILDLSGNC-----PR-CYNAP-FPCTPCKNNSPLQI: 259 SecStr : SS EE TTTTTT TT EEE SS S SS TT SEEE SS B TTTTTT TT EEE TTSS----- - TT S-S GGG B : ExpBur :beeebeeeeebbeebeebebbbbbbbebeebbeebbebbbebbbbbbebeebeeebbeebeebebbbbbbbb-----bb-eeeee-beeeeeeeeeebeb: queryA 115:SDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSP: 214 : * * * * * *** * * ** **** * * * * * * ** * * * * ** : 5gmf_A_1 260:PVNAFDALTELKVLRLHSNSLQHVPPRWFKNINNLQELDLSQNFLAK-EIGDAKFLHFLPNLI------------QLDLSFNFELQVYRASMNLSQAFSS: 346 SecStr : TTTTTT TT EEE TTS S GGGGTT EEE SSS HH-HHHH GGGGG TT ------------EEE S TT EEE GGGGG: ExpBur :eeebbeebeebebbbbbbbbbeebeeebbeebeebeebbbbbbebbe-bbeebebbeebeebe------------ebbbbbbbeeeeebebbebbebbee: queryA 215:GCFHAIGRLFGLF---LNNVQLGP--SLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNN: 309 : * * * * ** * * * * * ** * *** * : 5gmf_A_1 347:LKSLKILRIRGYVFKELKSFQLSPLHNLQNLEVLDLGTNFIKIANLS------------MFKQFKRLKVIDLSVNKISPXXXXXXX-----XXXXXXXXX: 429 SecStr : TT EEE TT EEEE GGGGGGGTT TT EEE SS EE GG------------GGGGGTT SEEE S ---------------------: ExpBur :beebeebbbbbbbbeebeeebbebbbebeebebbbbbbbebeebebb------------bbeebeebebbbbbebebee---------------------: queryA 310:IQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPL: 409 : * * ** ** * * * * *** * * ** * ** * ** * ** *: 5gmf_A_1 430:XXXXXXXVLEQLYYFRYDKYARSCRFKXXXXXXXXX----XXSCYKYGQTLDLSKNSIFFIKSSDFQHLSFLKCLNLSGNLIS-QTLNGSEFQPLAE--L: 522 SecStr :------- SS SS S TT SS --------------- GGGS EEE SS GGGGTT TT SEEE TTS - S SSTT TT-- : ExpBur :-------eeeeebbeeebbeeeeeeee---------------ebeeeeebbbbbebebeebebeebeebebbbbbbbbebebe-bebebebbebbee--b: queryA 410:HILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLT: 509 : * * * ** * ***** * * * * * * ** ** * ** * : 5gmf_A_1 523:RYLDFSNNRLDLLHSTAFEELRKLEVLDISSNS--------HYFQSEGITHM-LNFTKNLKV----------LQKLMMNDNDISSSTSRTMESESLRTLE: 603 SecStr : EEE SS TTTTTT TT EEE TT --------GGGGSTT -GGGGGG TT---------- EEE TT SSS EESS EEE: ExpBur :ebbbbbebebbbeeeebbebbeebebbbbbebe--------eebeeeeeebb-bebbeebee----------beebbbbebebeebebeebebebbebbb: queryA 510:I----LDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASV: 605 : ** * * *** ** * * * * * * * * ** * * * ** * * * * : 5gmf_A_1 604:FRGNHLDVLWRDGDNRYLQLFKNLLKLEELDISKNSLSFLPSGVFDGMP-------PNLKNLSLAKNGLKSFIWEKLRYLKNLETLDLSHNQLTTVPERL: 696 SecStr : TTS HHHHT TT TTTTTTTEETT EEE SS S TTTTTTS -------TT EEE SS GGGGGG TT EEE SS S G: ExpBur :bebbebeebbeeeeeebbebbeebeebeebbbbebebeebbeebbebbb-------eebeebbbbebebeebebeebeebeebebbebbebebeebbeeb: queryA 606:FNNQVSLKSLNLQKNLITSVEKKVFGPAFR-------------------------NLTELDMRFNPFDCTCESIAWFVNWINETHTNIPELSSHYLCNTP: 680 : * *** * * * * * * ** ** * * * *** *** * * ** * * *: 5gmf_A_1 697:SNCSRSLKNLILKNNQIRSLTKYFLQDAFQLRYLDLSSNKIQMIQKTSFPENVLNNLKMLLLHHNRFLCTCDAV-WFVWWVQHTEVTIPYLATDVTCVGP: 795 SecStr :GGT SS EEE SS TTTTTT TT EEE TTS TTTS HHHHTT SEEE S EE SGGGH-HHHHHHHH S TTHHHH BEEES: ExpBur :bebbeebeebbbeebebeebbeebbeebeebeebbbbebbbeebeeebbbeebbeebeebbbbebebebeeebe-bbbebbeebebebeebeeebebebe: queryA 681:PHYHGFPVRLFDTSSC: 696 : * * * *: 5gmf_A_1 796:GAHKGQSVISLDLYTC: 811 SecStr :GGGTT BGGG TT : ExpBur :eeeeeeebbebebeee: Contact : b |