Protein Model on 4xgo_A_1_F_1 (TEMPLATE: 4xgo )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(TLR3_HUMAN) A 1 (A) polymer(polypeptide(L)) [340 aa] Anopheles Plasmodium-responsive Leucine-rich repeat protein 1B :F2YBL9_ANOGA
2 b F 1 (A) non-polymer(ACT) ACETATE ION 83G(R) 84F 107Q(D) 108H(R) 131M(S) 132S(N) (identity: 16.7 %/32.0 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:4xgo_A_1 identity=32.0%
queryA        53:ITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITL: 152
                :  ****   *        *        *   ** *  * *   *  * * ** *  * ** *    *     **      *    *    *     *  *:
4xgo_A_1      25:VEVLNLNGLQIEEIDTNAFAYAHTIQKLYMRFNVIRYLPPHVFQNVPLLTVLMLDRNDLSSLPPGIFHNTPKLTMMSMSNNNLERIEDDTFQATTALQNL: 124
SecStr          :TSEEE TTS      TTTTTT TT SEEE  SS      TTGGGG TT  EEE  SS      TTTTTT TT  EEE  SS   B  TTTTSS TT  EE:    
ExpBur          :eebeeeeeeeeeebeeeebeebeebeebbbbebebeebbeebbeebeebebbbbbebebbebeeebbeebeebeebbbbebebeebeeebbeebeebeeb:    
Contact         :                              bb                      bb                      bb                    

queryA       153:DLSHNGLSSTKLGTQVQL--ENLQELLLSNNKIQALKSEELDIFANS----------SLKKLELSSNQIKEFS-----PGCFHAIGRLFGLFLNNVQLGP: 235
                : ** * *    *     *   *    ***   *     ****   *            *  * *  *           **            *  * *  :
4xgo_A_1     125:QLSSNRLTHVDLALIPSLFHVNVSYNLLSTLAI-PIAVEELDASHNTINVVRGPVNVELTILKLQHNNLTDTAWLLNYPG------------LVDVDLSY: 211
SecStr          :E  SS  SB  GGG TT SEEE  SS  SEEE - TT SEEE  SS   EEE S  S   EEE  SS     GGGGG TT------------ SEEE  S:    
ExpBur          :ebbebebeebebeebeebeebbbbebebeebbb-beebbebbbbebebeebeeeebeebbebebbebebeebebbeebbb------------bbbbbbbe:    

queryA       236:SLTEKLCLE--LANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNI: 310
                :   **              *  **  *       * *     *  **** * *  *     *    * *  *  * *:
4xgo_A_1     212:NQLEKITYQHFVKMQRLERLYVSNNRLVALD---FYGRPIPTLKVLDLSHNHLMWVEHNQ-AQFDKLQYLYLDHNSI: 284
SecStr          :S  S   GGGGTT SS  EEE  SS   EEE---E S   TT  EEE  SS  SEEEE T-TTTTT SEEE  SS  :    
ExpBur          :bebeebebebbeebeebeebebbebebeebe---beeeebeebebbbbbebebeebebee-ebbeebeebebbebeb:    


Input Residue Numbers for Focused Sites

ex) 2,15,123