[pdbjlvh2]Protein Model on 4qdh_A_1_I

Protein Model on 4qdh_A_1_I_1 (TEMPLATE: 4qdh )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(TLR3_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [402 aa]	Variable lymphocyte receptor B, Toll-like receptor 9 chimera :Q4G1L2_EPTBU:TLR9_MOUSE:Q4G1L2_EPTBU
2	b		I 1 (A)	non-polymer(SO4)	SULFATE ION	139K(H) 140N(W) 167Q(N) (identity: 0.0 %/32.5 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:4qdh_A_1 identity=32.5%

queryA        26:TKCTVSHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQ-LSDKTFAFCTN: 124
                :  *  *     *    ** **   *   * * *  * *  **   *    *** *    *      **    *  *  * * **   *      *   **:
4qdh_A_1      10:SRCSCSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSRNNLVTIKPEMFVNLSRLQCLSLSHNSIAQAVNGSQFLPLTN: 109
SecStr          :TT EEETTEEE  SS  SS  S   TT SEEE  SS      TTTTTT TT  EEE  SS      GGGGTT TT SEEE  SS    B SS SSTT TT:    
ExpBur          :eebeeeeeebebeeeebeebbeebeeebeebbbeebebeebeeeebeebeebeebbbbebebeebeeebbeebeebeebbbbebebebebebebbeebee:    

queryA       125:LTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNG--LSSTKLGTQ----VQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFH: 218
                :*  * *  *         *     *  **** *         *        *  ** * *  * *    *  *      *   *  * *           :
4qdh_A_1     110:LQVLDLSHNKLDLYHWKSFSELPQLQALDLSYNSQPFXXXXIGHNFSFVTHLSMLQSLSLAHNDIHTRVSSHLN---SNSVRFLDFSGN-----------: 195
SecStr          :  EEE  SS  B   TTTTTT TT  EEE  S  S  ----     THHHH TT  EEE TTS   SSS S  E---ESS  EEE TTS-----------:    
ExpBur          :beebebbebebbbbeeebbebbebbeebebbebeeee----ebeebebbeebeebeebbbbebebeeebeeebe---bebbeebbbbeb-----------:    
Contact         :              bb                            b                                                       

queryA       219:AIGRLF---GLFLNNVQLGPSLTEKLCLELANTSIRNLSLSN------SQLSTTSNTTFLG-LKWT------NLTMLDLSYNNLNVVGNDSF: 294
                :  **     ** *   *    *   * * *       *   *      *          *    **      **  ***  * *    *   :
4qdh_A_1     196:GMGRMWDEGGLYLHFFQ---GLSGLLKLDLSQNNLHILRPQNLDNLPKSLKLLSLRDNYLSFFNWTSLSFLPNLEVLDLAGNQLKALTNGTL: 284
SecStr          : HHHHHHSTTTTTTTTT---EETT  EEE TTS  S   HHHHHTS TT  EEE TTS  S   GGGGGG TT  EEE TTS   SB SS  :    
ExpBur          :bbbebbeeeeebeebbe---ebeebeebebbebebeebeeebbebbbeebeebbbeebebeebebebbeebeebeebbbbebebebbeeeeb:

Protein Model on 4qdh_A_1_I_1 (TEMPLATE: 4qdh )

Input Residue Numbers for Focused Sites