Protein Model on 4oqt_A_1_A_2
(TEMPLATE: 
4oqt
)Protein Model on 4oqt_A_1_A_2
(TEMPLATE: 4oqt
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(TLR3_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [475 aa] | Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1 :LIGO1_HUMAN | |
| 2 | b | A 2 (A) | polymer(polypeptide(L)) [475 aa] | Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1 :LIGO1_HUMAN | 269L(Y) 270G 271L 275N 292D(L) 295A(R) 296W(H) 298P(V) 299Q(Y) 323N(R) (identity: 30.0 %/26.1 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:4oqt_A_1 identity=26.1% |
queryA 27:KCTVSHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLT: 126
: * * ** ** * * * * * * * * * ** * * * * * * * ***:
4oqt_A_1 8:ECSAQDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLT: 107
SecStr :EEETTTTEEE S SS S TT SEEE SS EE TTSSTT TT EEE SS EE TTTTTT TT EEE SS S TTSSTT TT :
ExpBur :eeeeeeebbebeeeebeebbeebeeebeebbbbebebeebeeeebeebeebeebbbbebbbeebeebbbeebeebebbbbeebebeebeebbbeebeebb:
queryA 127:ELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLE-LSSNQIKEFSPGCFHAIGRLFG: 225
: * * * * ** * * * * * * * * * * * * * * ** :
4oqt_A_1 108:KLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYS------FKRLYR: 201
SecStr :B SS EE TTTTTT TT EEEE TT EE TTSSTT TT EEEEES SS HHHHTT TT EEEEES EE TT ------S S TT:
ExpBur :ebbbbebebeebeeebbeebeebebbebbbeebeebbeebbbebeebeebbbbebebeebbbebbbbbebbebbebeebebebbeeeb------beebee:
queryA 226:LFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVR: 325
:* * * * ** *** * ** * * * * ** * ** * :
4oqt_A_1 202:LKVLEISHWP-----------------------YLDTMTPNCLYGL---NLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQ: 275
SecStr : EEEEE T-----------------------T EE TTSSTT --- SEEEEESS SS HHHHTT TT EEE SS EE TTSSTT TT :
ExpBur :beebebbebe-----------------------ebeebeebbbeeb---ebebbbbbebebeebbbebbeebeebeebebbebebebbeeeebeebeebe:
Contact : bbb b b bb bb b
queryA 326:YLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNS: 389
: * * * * * ** * * ** * * :
4oqt_A_1 276:EIQLVG---------GQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSN: 330
SecStr :EEE S---------S EE TTTTTT S EEE SS S GGG S GGG EEE TTS:
ExpBur :ebbbbe---------bebeebeeebbeebeebebbbbeebebebbeeebbeebeebebbbbeeb:
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[assembly_id:1]
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