Protein Model on 4lxr_A_1_F_1 (TEMPLATE: 4lxr )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(TLR3_HUMAN) A 1 (A) polymer(polypeptide(L)) [755 aa] Protein toll :TOLL_DROME
2 b F 1 (D) branched(oligosaccharide) beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose 363E(R) 390F(Y) 413N 415T 416K(H) (identity: 40.0 %/27.7 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:4lxr_A_1 identity=27.7%
queryA        41:KLTQVPDDLPTNITVLNLTHNQLR----RLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQ: 136
                : **  *  * *     ** *  **      *   *     * *   * *           * * ** ***  * *  *    *   *         * * :
4lxr_A_1     134:RLTHIPANLLTDMR--NLSHLELRANIEEMPSHLFDDLENLESIEFGSNKLRQMPRGIFGKMPKLKQLNLWSNQLHNLTKHDFEGATSVLGIDIHDNGIE: 231
SecStr          :S     TTTTTT T--T SEEEEES      GGGGTT TT  EEE  SS   S  TT GGG TT  EEE  SS      GGGGTT TT  EEE  SS   :    
ExpBur          :eebebebebbeebe--ebebbbbebebeebeeebbebbeebeebbbbebebeebbeebbeebeebeebbbbbbebeebeeebbeebeebebbbbeebebe:    

queryA       137:KIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANS-SLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGP: 235
                :      *    *     ** *   *   *       * *  * **    *       ***   *  * *            *            *  ** :
4lxr_A_1     232:QLPHDVFAHLTNVTDINLSANLFRSLPQGLFDHNKHLNEVRLMNNRV-PLATLPSRLFANQPELQILRLRA-ELQSLPGDLFEHSTQ-----ITNISLGD: 324
SecStr          :   TTTTTT TT  EEE  S   S   TTTTTT TT  EEEE   SS-      TTTT S TT  EEEE S-      TTTTTT TT-----  EEE  S:    
ExpBur          :ebeeebbbebeebeebbbbbbebeebeebbbeebeebebbebeebeb-ebeebbeebbbebeebebbebeb-ebeebeeebbeebee-----bbebebbe:    

queryA       236:SLTEKLCLELANTSIR--NLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSF: 333
                : *   *   *         * ***  *       *     **** * *  * *     * *  *  *       *      *         * * *    :
4lxr_A_1     325:NLLKTLPATLLEHQVNLLSLDLSNNRLTHLPDSLF--AHTTNLTDLRLEDNLLTGISGDIFSNLGNLVTLVMSRNRLRTIDSRAFVSTNGLRHLHLDHND: 422
SecStr          :S  S   TTTTTT TT  EEE  SS  S   TTTT--SS TT  EEE  SS   EE SSTTTT TT  EEE  SS   EE TTTTSS TT  EEE  SS :    
ExpBur          :bebeebeeebbeebeebeebbbbebebeebeeebb--eebeebeebebbebebeebeeebbeebeebebbbbbebebeebeeebbeebeebeebebbebe:    

queryA       334:T--KQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKI: 422
                :    *      *       *     *  **   * *             *  * *  *      *  *    *    **  * * ***  *:
4lxr_A_1     423:IDLQQPLLDIMLQTQINSPFGYMHGLLTLNLRNNSIIFVYNDWKNTMLQLRELDL--SYNNISSLGYEDLAFLSQNRLHV-NMTHNKIRRI: 510
SecStr          :  TT  HHHHHTT     GGGG TT  EEE  SS   S  HHHHHT TT  EEE --TTS   EE GGGG     S  EE-E TTS   EE:    
ExpBur          :bebebeeeebeeeeebebbbeebebbebbbbeebebebbbbbbbeebeebeebbb--bebebeebbeebbebebeeebeb-ebbebebeeb:    
Contact         :                               b                          b                      b bb

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