Protein Model on 4cnm_A_1_B_1
(TEMPLATE: 
4cnm
)Protein Model on 4cnm_A_1_B_1
(TEMPLATE: 4cnm
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(TLR3_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [283 aa] | TROPHOBLAST GLYCOPROTEIN :TPBG_HUMAN | |
| 2 | b | B 1 (B) | branched(oligosaccharide) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | 57N(F) 59T 81D(N) 83G(S) 103V(Q) 105N(D) 138I (identity: 28.6 %/31.4 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:4cnm_A_1 identity=31.4% |
queryA 27:KCTVSHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRY---SQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCT: 123
: * * ** ** *** * ** *** *** * * * * ** * * * ** * ** *** :
4cnm_A_1 11:ECSEAARTVKCVNRNLTEVPTDLPAYVRNLFLTGNQLAVLPAGAFARRPPLAELAALNLSGSRLDEVRAGAFEHLPSLRQLDLSHNPLADLS--PFAFSG: 108
SecStr :EEETTTTEEE SS SS S TT SEEE S EEE TTTT SS TT EEE TTS EEEE TTTTTT TT EEE S SEE --TTTTT :
ExpBur :ebeeeeebbebeeeebeebbeebbebbeebebbebebeebeeebbeeeeebeebbbbbbeebebeebeebbbeebeebeebbbbebebeebb--eebbeb:
Contact : b b b b b b
queryA 124:NLTELHLMSNSIQKIKNN---PFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFAN-SSLKKLELSSNQIKEFSPGCFHA: 219
: * * * * * * * * * * * * * * * * ** * ** * * :
4cnm_A_1 109:SNXXXXXPSPLVELILNHIVPPEDERQN-----RSFEGMVVAALLAGRALQGLRRLELASNHFLYLPR---DVLAQLPSLRHLDLSNNSLVSLTYVSFRN: 200
SecStr : ----- EEE TT TTGGGSS-----S HHHHHHHHHHGGGTTTT EEE SS S H---HHHHH TT EEE SS TT TT:
ExpBur :ee-----ebebebbbbbebbbeebeeee-----eebbebbbebbbbeebbeebeebebbebebeebbe---ebbeebeebebbbbbebebeebeebebee:
Contact : b
queryA 220:IGRLFGLFLNN: 230
: * * * :
4cnm_A_1 201:LTHLESLHLED: 211
SecStr : TT EEE TT:
ExpBur :beebebbebbe:
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[assembly_id:1]
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