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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(TLR3_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [396 aa] | LEUCINE-RICH REPEAT-CONTAINING PROTEIN 4C :LRC4C_HUMAN | |
2 | b | B 1 (B) | polymer(polypeptide(L)) [326 aa] | NETRIN-G1 :NTNG1_HUMAN | 411I 416K(R) 435V(T) 437D(E) 439G(F) 462Y(W) 464S(R) 484R 486M(D) 510I(Y) 515N(M) 534I(E) 538Q(S) 570E(I) 571S(Q) 592D(N) 595L(H) 639E(R) 641D(H) 644F(H) 669P(T) 670E(A) 672S(C) 674H(R) (identity: 8.3 %/34.6 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:3zyj_A_1 identity=34.6% |
queryA 400:TFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDS-S: 498 : * * * * ** * * * ** ** * * * * * * * * * * * *** ** * ** *: 3zyj_A_1 83:SFKHLRH--LEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNG-AFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGE--LKRLSYIS: 177 SecStr :TTSS SS-- EEE SS EE GGGGTT SS EEE SS SS TT-TS S SS EEE S EE TTTTTT TT EEE -- TT EE : ExpBur :ebbebee--beebbbbebebeebeebbbeebeebebbbbeebebeebbee-bbbebebbeebbbeebbbeebeeebbeebeebbebbbbe--beebeeeb: Contact : b b b b b b b b b queryA 499:PSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNL: 598 : * * ** * * * * * * ** *** * * ** ** ** * * * * * * * ***: 3zyj_A_1 178:EGAFEGLSNLRYLNLAMCNLREIPN--LTPLIKLDELDLSGNHLSAI----RPGS----FQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNL: 267 SecStr :TTTTTT SS EEE TTS SS -- TT SS EEE TTS EE---- TTT----TTT TT EEE TT EE TTSSTT TT EEE TTS : ExpBur :ebbbeebeebeebbbbebebeebbe--bebbeebeebbbbebebebb----eeee----beebeebeebbbeebebeebeeebbeebeebebbbbbebeb: Contact : b b b b bb b b queryA 599:NTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCESIAWFVNWINETHTNIPELSSHYLCNTPPHYHG: 685 : ** * * ** * * * * ** ***** *: 3zyj_A_1 268:TLLPHDLFT-------------------------PLHHLERIHLHHNPWNCNCD-ILWLSWWIKDMAPSNTACCAR--CNTPPNLKG: 326 SecStr : TTTTS-------------------------S TT EEE SS EE SST-THHHHHHHHTTS SS S B--EEESTTTTT: ExpBur :eebbbebbe-------------------------ebeebeebbbeebebebeeb-bbbbbeebeeebeeeeebebe--beeeeeeee: Contact : b b b bb b b |