Protein Model on 3wpf_A_1_G_1 (TEMPLATE: 3wpf )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(TLR3_HUMAN) A 1 (A) polymer(polypeptide(L)) [740 aa] Toll-like receptor 9 :TLR9_MOUSE
2 b G 1 (A) non-polymer(SO4) SULFATE ION 533E(R) (identity: 0.0 %/29.3 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:3wpf_A_1 identity=29.3%
queryA        32:HEVADCSHLKLTQVPDDLP----TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISK------------LEPELCQKLPMLKVLNLQHNELSQ--: 113
                :*   **  * *  **         *** * *  *    *    *   * *  *    *                 **        *  ***  *      :
3wpf_A_1      19:HGLVDCNWLFLKSVPRFXXXASCSNITRLSLISNRIHHLHNSDFVHLSNLRQLNLKWNCPPTGLSXXXXSCHMTIEPRTFLAMRTLEELNLSYNGITTVP: 118
SecStr          :TTEEE TTS  SS    ---  STT  EEE TT    EE TTTTGGGTT SEEE TTSB SS   ----    EE TTTTTT TT  EEE  SB  SS  :    
ExpBur          :eeebbbbebeeeebbee---eebeebeebbbbebebeebeeebbeebeebeebebeebbbbeeee----ebebeeeeebbeebeebeebebbebbbeebb:    

queryA       114:------------------LSDKTFAFCTNLTELHLMSNSIQK------IKNNP--FVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALK: 187
                :                  *     *    *  *    *   *       *  *        *  * *  * *  **   *     *  ** * * *  * :
3wpf_A_1     119:RLPSSLVNLSLSHTNILVLDANSLAGLYSLRVLFMDGNCYYKNPCTGAVKVTPGALLGLSQLTHLSLKYNNL--TKVPRQLP-PSLEYLLVSYNLIVKLG: 215
SecStr          :   TT  EEE TTS   EE GGGGTT TT  EEE   SSBTTB  SS  EE TTTTTT TT  EEE  SS  --SS  SS  -TT SEEE TTS   EE :    
ExpBur          :ebbeebbebbbbbbebeebeeebbeebeebebbebbbbbbeebebeeebebeeebbeebeebbebbbeebeb--eebbeebb-eebeebbbbbbebeebb:    

queryA       188:SEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNL-: 286
                : * *      **  *    *        * **             * *     *           * *  * * *     * **    *  **** * * :
3wpf_A_1     216:PEDLAQL--TSLRVLDVGGNCRR-----CDHAPNPCIECGQKSLHLHPETFHHL------SHLEGLVLKDSSLHTLNSSWFQGL--VQLSVLDLSENFLY: 300
SecStr          :GGGSTT --TT SEEE TTSSB ----- TT SS   B SSSS EE TTTTTT ------TT  EEE  SS      HHHHTT -- S  EEE  SSS H:    
ExpBur          :eebbeeb--eebeebbbbbbbbb-----beeeeeeeeebeeeebebeeebbeeb------eebebbbbbbbbbeebeebbbeeb--eebeebbbbebbbb:    

queryA       287:-NVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLH------GLFNVRYLNLK----RSFTKQSIS-LASLPKIDDFSFQW-------------LKCLEHLN: 361
                :        *  *  *    *  *         **       *     **      *   *     ** ***      *                 *    :
3wpf_A_1     301:ESITHTNAFQNLTRLRKLNLSFNYRKKVSFARLHLASSFKNLVSLQELNMNGIFFRLLNKYTLRWLADLPKLHTLHLQMNFINQAQLSIFGTFRALRFVD: 400
SecStr          :HHHTT STTSS TT  EEE TT   SSS        GGGGG TT  EEE TT   SEE TTTTGGGTT TT  EEE  SS   EE GGGGGS SS  EEE:    
ExpBur          :bbbeebebbeebeebeebebbebeeeeeeeeebebbebbeebeebeebbbbbbebeebbeebbeebbebeebebbbbeebebeebebbbbeebebbeebb:    

queryA       362:MEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNET------FVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGL: 455
                :  ** * *                                     *            *  *    *    *  *  *  * *  * * *   *     *:
3wpf_A_1     401:LSDNRISGPSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNFMDRCKNFKFTMDLSRNNLVTIKPEMFVQLSRLQCLSLSHNSIAQAVNGSQFLPL: 500
SecStr          :  SS   S   ---------------------------------  S    SSS EEE  SS  SS  GGGGTT TT  EEE  SS    B  S S TT :    
ExpBur          :bbebebebeee---------------------------------eebbebeeeebbbebbebebeebeeebbeebeebebbbbbebebebebebebbeeb:    

queryA       456:ENIFEIYLSYNKYLQLTRNSFALVPSLQRLML----RRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANP: 551
                : *     ** **       **   * ** * *                *    *  *  * *  * *       *        **   *   * *     :
3wpf_A_1     501:TNLQVLDLSHNKLDLYHWKSFSELPQLQALDLSYNSQPFXXXGIGHQFSFVTHLSMLQSLSLAHNDIHTRVSSHLNS-NSVRFLDFSGNGMGRMWDEG--: 597
SecStr          :TT  EEE  SS  B   TTTTTT TT  EEE TT     ---  S BTGGGGG TT  EEE TT    TTB S  EE-SS  EEE TTS HHHHHTT --:    
ExpBur          :eebebbbbbebebebeeeebbebbeebebbbbbebebee---eeeebbebbeebeebebbbbbebeeeeebbeebeb-ebbeebebbebebbebbeee--:    
Contact         :                                                                                 b                  

queryA       552:GGPIYFLKGLSHLHILNLESNGFDEIPVEVFKD-------------------------LFELKIIDLGLNNL-----NTLP-------------------: 602
                :*    *  *** *  * *  *                                     *  *   **  * *      ***                   :
3wpf_A_1     598:GLYLHFFQGLSGLLKLDLSQNNLHILRPQNLDNLPKSLKLLSLRDNYLSFFNWTSLSFLPNLEVLDLAGNQLKALTQGTLPNGTLLQKLDVSSNSIVSVV: 697
SecStr          :STTTTTTTEETT  EEE TTS      HHHHHTS TT  EEE TTS      GGGGGGSTT  EEE TTS    B S    TT    EEE TTS    B :    
ExpBur          :eebbebbeebeebeebebbebebeebeeebbebbbeebeebbbeebebeebebebbeebeebeebbbbebebebbeeeebbeebebeebbbbebebeebe:    

queryA       603:ASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCESIAWFVNWINETHTNIPELSSHYLCNTPPHYHGFPVRLFDTSSC: 696
                :   *   * **  **  *    *    ***    ** ** * **  * *   * **    *  *  * *     *  *    *      *   *:
3wpf_A_1     698:PAFFALAVELKEVNLSHNILKTVDRSWFGPIVMQLTVLDVRSNPLHCACG--AAFVDLLLEVQTKVPGLANGVKCGSPGQLQGRSIFAQDLRLC: 789
SecStr          :TTTTTT TT  EEE  SS  S   GGGTGGGGGT SEEE  SS EE  TT-- THHHHHHHTGGGSTTTTTTSBEEESTTTBTSBTTSS GGG :    
ExpBur          :eebbeebeebeebebbebebeebeeebbeebbeebeebbbeebebebeee--bebbebbbebeeebeebbeebebeeeeebeeebbbeeebeee:

Input Residue Numbers for Focused Sites

ex) 2,15,123