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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(TLR3_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [749 aa] | Toll-like receptor 9 :Q2EEY0_HORSE | |
2 | b | W 1 (B) | non-polymer(GOL) | GLYCEROL | 606F 607N(A) 609Q(A) 610V(T) 612L 613K(R) 630F 633A(L) 636N(S) 637L (identity: 40.0 %/29.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:3wpc_B_1 identity=29.0% |
queryA 42:LTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLK--VLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIK: 139 :** ** ** * * * * * **** * * * ** ** * * * * : 3wpc_B_1 190:LTTVPRSLPPSLEYLLLSYNHIVTLAPEDLANLTALRVLDVGGN---------CRRCDHARNPCVECPH-KFPQLHSDTFSHLSRLEGLVLKDSSLYQLN: 279 SecStr : SS SS TT SEEE TTS EE GGGGTT TT SEEE TTS---------S GGG SS T-T EE TTTTTT TT EEE SS S : ExpBur :beebbeebbeebebbbbbbbebbebbbebbeebeebeebbbbbb---------bbbbeeeeeeeeebee-ebeeeeeebbeebeebebbbbebbbbeebe: queryA 140:NNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTE: 239 : * ** **** * * * * * * * ** * * * * ** : 3wpc_B_1 280:PRWFRGLGNLTVLDLSENFLYDCITKTKA--------------FQGL----------AQLRRLNLSFNYHKKVS--------------FAHLTLAPSFGS: 341 SecStr :THHHHT TT EEE TTSS TTGGGT T--------------TTT ----------TT EEE TT SS --------------BS GGGGG: ExpBur :eebbeebeebeebbbbbbbbbebbeebeb--------------beeb----------eebeebebbbbbeeeee--------------beebebbebbeb: queryA 240:KLCL-ELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSI: 338 : * * ** * *** * * * * * * * * * * * * * : 3wpc_B_1 342:LLSLQELDMHGIFFRSLSQKTLQPLA-------RLPMLQRLYLQMNFINQAQLGIFKDFPGLRYIDLSDNRISGAVEXXXXXXXXXXXXXXXXXXXXXXX: 434 SecStr : TT EEE TTS BSEE HHHHGGGT-------T TT EEE SS EE GGGGTT SS EEE SS SS -----------------------: ExpBur :beebeebbbbbbbbeebeeebbebbb-------ebeebeebbbbebebeebebbbbeebeebebbbbbebebebeee-----------------------: queryA 339:SLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDL: 438 : ** * * ** * * * ** * ** * * * * ** * * ** ***: 3wpc_B_1 435:XXXXXXXSEDFMPSCKNLSFTLDLSRNNLVTVQPEMFAQLSRLQCLRLSHNSIS-QAVNGSQFVPL--TSLQVLDLSHNKLDLYHGRSFTELPRLEALDL: 531 SecStr :------- TTTS STTSS EEE SS SS GGGGTT TT SEEE TTS - S SSTT --TT EEE SS TTTTTT TT EEE : ExpBur :-------eeebbebbeebebbbbbbebebeebeeebbeebeebebbebbebebe-bebebebbeeb--eebbbbbbbebebebeeeebbebbeebebbbb: queryA 439:GLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSP-----------FQPLRNLTILDLSNNNIANINDDMLE: 527 : * * * * * ** * * * * ** * * ** ** * **** * * : 3wpc_B_1 532:SYNSQPFSMRGV---GHNLSFVAQLPTLRYLSLAHNGIHSRVSQQLCSTSLWALDFSGNSLSQMWAEGDLYLRFFQGLRSLIRLDLSQNRLHTLLPCTLG: 628 SecStr : S HHHHTSTT --- GGGGG TT EEE TTS SSS S EESS EEE SS HHHHHTSTTTTTTTTTEETT EEE SS S HHHHT: ExpBur :bebeebbeeeee---ebebebbeebeebebbbbbebebbeebbeebebebbebbbbbbbbbeebbeeeeebeebbbbbeebbbbbbbebebeeeeeebbe: queryA 528:GLEK-LEILDLQHNNLARL-WKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSV: 625 : * * * * * * ** * * * * * * * * * * * * *** * *: 3wpc_B_1 629:NLPKSLQLLRLRNNYLAFFNWSS---------LTLLPNLETLDLAGNQLKALSNGSLPSGTQLQRLDVSRNSIIFVVPGFFALATRLRELNLSANALRTV: 719 SecStr :TS TT EEE TTS S GGG---------GGGSTT EEE TTS EE SS S TT EEE TTS EE TTTTTT TT EEE SS S : ExpBur :bbbeebebbebeebebeebebeb---------beebeebebbbbbbbebebbeeeebbeebebeebebbebebeebeeebbeebeebeebebbebebeeb: Contact : bb bb bb queryA 626:EKKVFGPAFRNLTELDMRFNPFDCTCESIAWFVNWINETHTNIPELSSHYLCNTPPHYHG: 685 :* ** * ** ** * * * ** * * * * * *: 3wpc_B_1 720:EPSWFGFLAGSLEVLDVSANPLHCACG--AAFVDFLLQVQAAVPGLPSRVKCGSPGQLQG: 777 SecStr : GGGGTT TT SEEE S EE TT-- HHHHHHHHTGGGSTTHHHH BEEESGGGBT: ExpBur :ebebbeeebeebeebbbbebebebeee--bebbebbbebeebbebbbbebebbbeeeeee: Contact : b b bb |