Protein Model on 3vq2_A_1_K_1
(TEMPLATE: 
3vq2
)Protein Model on 3vq2_A_1_K_1
(TEMPLATE: 3vq2
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(TLR3_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [581 aa] | Toll-like receptor 4 :TLR4_MOUSE | |
| 2 | b | K 1 (C) | non-polymer(LP5) | (R)-((2R,3S,4R,5R,6R)-3-HYDROXY-2-(HYDROXYMETHYL)-5-((R)-3-HYDROXYTETRADECANAMIDO)-6-(PHOSPHONOOXY)TETRAHYDRO-2H-PYRAN-4-YL) 3-HYDROXYTETRADECANOATE | 364D(K) (identity: 0.0 %/27.0 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:3vq2_A_1 identity=27.0% |
queryA 37:CSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQ: 136
:* ** **** * * * * * * * * ** * * * * * * * * * * * * :
3vq2_A_1 18:CMDQKLSKVPDDIPSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLA: 117
SecStr : TTS SS TTS TT EEE TTS EE TTTTTT TT EEE TT EE TTTTTT TT EEE TT TTSSTT TT EEE TTS :
ExpBur :beeeebeebbeebeeebeebbbbebebeebebeebeebeebeebbbbebebeebeeebbebbeebbebbbebbebeebeeebbeebeebebbbbbebebe:
queryA 137:KIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQ-LENLQELLLSNNKIQALKSEELDIFANSSLK--KLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQL: 233
: * * * ** * ** * ** ** * ** * * * * * * * * * * :
3vq2_A_1 118:SLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGI-KLHELTLRG-NF: 215
SecStr : SSSS TT TT EEE SS GGGGT TT EEE SS EE TTTTHHHHH TT EEE TT EE TTTTTT -EEEEEEEES- :
ExpBur :ebeebebeebeebeebebbebebeebebbebbeebeebeebbbbebebeebeeebbebbeeeeeeebbbbbbebebeebeeebbeeb-ebebbbbeb-bb:
queryA 234:GPSLTEKLCLE-LANTSIRNLSLS----NSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYL-: 327
: * * ** ** * * * ** * * * ** * ** :
3vq2_A_1 216:NSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTN-------------DFSDDIVKFHCLANVSAMSLAGV-SIKYLE: 301
SecStr :S HHHHHHHHHTTTT EEEEEEEE TTS S GGGGTTGGGSEEEEEEE T-------------T GGGGS GGGTT SEEEEES - :
ExpBur :eebeebeebbebbeebebebbbbbbeeeeeebeebebebbebbeebebeebebbbbe-------------ebeeebbebebbbebebbbbebb-ebeebe:
queryA 328:NLKRSFTKQSISL--ASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESD: 425
: * ** * * ** * * * * * * * ** ** * * * * * * * * :
3vq2_A_1 302:DVPKHFKWQSLSIIRCQLKQFPTLDLPFLKSLT-LTMNKGSISFKK----VALPSLSYLDLSRNALSFSGCC--SYSDLGTNSLRHLDLSFNG-AIIMSA: 393
SecStr : TT SEEEEES SS SS EEE-EES SS EE ---- TT EEE SS EEEEEE -- HHHH S EEE S S-EEEE :
ExpBur :ebeeebebeebbbeebebeebbebebeebeebb-bbebeeebebee----bebeebeebbbbebebebeebb--beebbbbeebeebbbbebe-ebebeb:
Contact : b
queryA 426:AFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDM: 525
: * * * ** ** ** * ** * * * *** **** * :
3vq2_A_1 394:NFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKD-NTLSNVFANTTNLTFLDLSKCQLEQISWGV: 492
SecStr : TT TT EEE TTSEEESTTTTTTTTT TT EEE TTS EE TTTTTT TT EEE TT EEGG-GEE S TT TT EEE TTS EE TTT:
ExpBur :bbebbeebeebbbeebebeebeeebbbebbeebebbbbbebebebeeebbbebbeebebbebbbbbbee-ebbbebbeebeebeebbbbebebeebeeeb:
queryA 526:LEGLEKLEILDLQHNNL: 542
: * * * ****:
3vq2_A_1 493:FDTLHRLQLLNMSHNNL: 509
SecStr :TTT TT EEE SS :
ExpBur :beebeebeebebbebeb:
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[assembly_id:1]
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