[pdbjlvh2]Protein Model on 3v47_A_1_H

Protein Model on 3v47_A_1_H_1 (TEMPLATE: 3v47 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(TLR3_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [441 aa]	Toll-like receptor 5b and variable lymphocyte receptor B.61 chimeric protein :B3DIN1_DANRE:Q4G1L2_EPTBU
2	b		H 1 (H)	branched(oligosaccharide)	2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose	623T(K) (identity: 0.0 %/29.8 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:3v47_A_1 identity=29.8%

queryA       288:VVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLS: 387
                :*  *  *  *  *    * **    *      ** *   * *                     *  *  ** *   ** *  *    *            :
3v47_A_1      69:VIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNF-------FKPLTSLEMLVLRDNNIKKIQPASF------------: 149
SecStr          :EE TTTTTT TT  EEE TT TT EE TTTTTT TT  EEE TTS  BTHHHHSST-------TTT TT  EEE  SSB  S    GG------------:    
ExpBur          :bbeeebbbebeebeebebbebeebebeebbbeebeebebbbbbebebebebbeeeb-------beebeebbebbbeebebeebebbeb------------:    

queryA       388:NSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKI-ESDAFSWLG-HLEVLDLG------LNE--IGQELTGQEWRGLENIFEIYLSYNKYLQ-LTRNSF: 476
                :  *   *               * * ** **   * * *     * *   * *        **   * *  *        *    ** *          *:
3v47_A_1     150:--FLNMRRF-------------HVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKN-TSITTLDLSGNGFKESMAKRFF: 233
SecStr          :--GGG TT ------------- EEE TT  BS   TTTSGGGTT EEEEEE TT B TT STT TTHHHH  TTTT- EEEEEE TTS   HHHHHHHH:    
ExpBur          :--beebeeb-------------ebbbbbebebebbbeebbebbeebebebbebbebebeebeeeeebbeebebbbee-bebeebbbbbbbbebbbbeebb:    

queryA       477:ALVPS--LQRLMLRRVALKNVDSSPSPFQPLRNLTI----------LDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHL: 564
                :        * * *              *    * *            ***   *             ** * *  *        *          ** **:
3v47_A_1     234:DAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNA--------FWGLTHL: 325
SecStr          :HHTTT  EEEEE TT TTTS  TT  SS    TTTTGGGTTS   EEE  SS   EE TTTTTT TT  EEE TTS   EE TTT--------TTT TT :    
ExpBur          :eebeebebebbebbebeebbbbeeeeeeebbeeebbebbeebebbebebbebebebbeeebbbbbeebeebebbebebeebeeeb--------bebbeeb:    

queryA       565:HILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCESIAWFVNWINE: 663
                :  ***  *    *    *  *  *   **  *    *    *     ** * *  *   **    *      *       ** ** *  *     * * :
3v47_A_1     326:LKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIF-DRLTSLQKIWLHTNPWDCSCPRIDYLSRWLNK: 423
SecStr          : EEE  SS   EE GGGGTT TT  EEE  SS   EE TTTTTT TT  EEE  SS  S   TTTT-TT TT  EEE  SS B   TTTTHHHHHHHHH:    
ExpBur          :eebbbbebebeebeeebbeebeebeebebbebebeebeeebbeebeebeebbbbbbebeebeeebb-eebeebeebebeebebebeeeebebbbebbee:    
Contact         :                                                          b

Protein Model on 3v47_A_1_H_1 (TEMPLATE: 3v47 )

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