Protein Model on 3t6q_A_1_E_1
(TEMPLATE: 
3t6q
)Protein Model on 3t6q_A_1_E_1
(TEMPLATE: 3t6q
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(TLR3_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [601 aa] | CD180 antigen :CD180_MOUSE | |
| 2 | b | E 1 (E) | branched(oligosaccharide) | alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | 412L(K) 413N(G) 439G(S) 440L(H) 462Y(N) 464S 465Y 484R(L) 486M(D) (identity: 22.2 %/32.3 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:3t6q_A_1 identity=32.3% |
queryA 346:IDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLS-NSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEI-: 443
:* * * * * ** ** * ** * * * * ** * * * ** * * *** * :
3t6q_A_1 269:ISSNTFHCFSGLQELDLTATHLSELPSGL-VGLSTLKKLVLSANKFENLCQISASNFPSLTH--LSIKGNTKRL--ELGTGCLENLENLRELDLSHDDIE: 363
SecStr : TTTTTT TT SEEE TTS S SS - S TT EEE TT SBGGGG GGG TT SE--EE S SS --B SSTTTT TT EEE SS :
ExpBur :beeebbebbeebeebebebbebeebeeeb-eebeebeebebbebebeebeebbbebbeebee--bebeebeeeb--ebbebbbeebeebeebebbebebe:
Contact : bb bb
queryA 444:GQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLA: 543
: * * **** * * * * * * * ** * **** * * * ** ** * * ** * :
3t6q_A_1 364:TSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLK-VKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHF-: 461
SecStr :EEEESTTTTTT TT EEE S S EEE TTTTTT TT SEEE TT EE- TT TTTT TT EEE TT BTT TTTTTT TT EEE TT B -:
ExpBur :beebbeebbeebeebeebebbebebbebeeebbeebeebeebebbebebe-eeeeebbbeebeebeebebbebebebbeeebbeebeebeebbbebbeb-:
Contact : b bb b b
queryA 544:RLWKHANPGGPIY---FLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTEL: 640
: * * * * * * ** * * * * ** * * *** * * * :
3t6q_A_1 462:-------PKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGIY-LNLASNHISIILPSLL-PILSQQRTI: 552
SecStr :-------GGGEE SS GGGG TT EEE TTS EE TTTTTT TT EEE SS GGGGGGGTT S E-EE SS GGGH-HHHHTSSEE:
ExpBur :-------eebebeeebbbeebeebeebbbbebebeebeeebbeebeebeebbbbebebebebbebbeebeebe-bbbbbbebeebeeebb-ebbeebebb:
queryA 641:DMRFNPFDCTCESIAWFVNWINETHTNIPELSSHYLCNTPPHYHGFPVRLFD-TSSC: 696
: * ** **** * * * * * ** ** * *** * * **:
3t6q_A_1 553:NLRQNPLDCTCSNI-YFLEWYKENMQKL-EDTEDTLCENPPLLRG--VRLSDVTLSC: 605
SecStr :E TT EE SGGGH-HHHHHHHH GGGE-E GGG BEEESGGGTT-- BGGG :
ExpBur :bbeebebbbeeebb-ebbebbeebeeeb-eebeebebeeeeeeee--eebeebeeee:
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[assembly_id:1]
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