[pdbjlvh2]Protein Model on 3t6q_A_1_B

Protein Model on 3t6q_A_1_B_1 (TEMPLATE: 3t6q )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(TLR3_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [601 aa]	CD180 antigen :CD180_MOUSE
2	b		B 1 (C)	polymer(polypeptide(L)) [139 aa]	Lymphocyte antigen 86 :LY86_MOUSE	363E(T) 364D(A) 412L(K) (identity: 0.0 %/32.3 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:3t6q_A_1 identity=32.3%

queryA       346:IDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLS-NSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEI-: 443
                :*    *     *  *           *    **  ** * ** * *  *       * ** *  * *   **             *  *  ***    * :
3t6q_A_1     269:ISSNTFHCFSGLQELDLTATHLSELPSGL-VGLSTLKKLVLSANKFENLCQISASNFPSLTH--LSIKGNTKRL--ELGTGCLENLENLRELDLSHDDIE: 363
SecStr          :  TTTTTT TT SEEE TTS  S   SS - S TT  EEE TT   SBGGGG GGG TT SE--EE  S SS  --B  SSTTTT TT  EEE  SS   :    
ExpBur          :beeebbebbeebeebebebbebeebeeeb-eebeebeebebbebebeebeebbbebbeebee--bebeebeeeb--ebbebbbeebeebeebebbebebe:    
Contact         :                 bb                                                b                                

queryA       444:GQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLA: 543
                :         * *       ****  * *    *   * *  * *    ** *    **** *  *  * **             **  *  * ** *   :
3t6q_A_1     364:TSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLK-VKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHF-: 461
SecStr          :EEEESTTTTTT TT  EEE  S S EEE TTTTTT TT SEEE TT  EE-  TT  TTTT TT  EEE TT   BTT TTTTTT TT  EEE TT B -:    
ExpBur          :beebbeebbeebeebeebebbebebbebeeebbeebeebeebebbebebe-eeeeebbbeebeebeebebbebebebbeeebbeebeebeebbbebbeb-:    

queryA       544:RLWKHANPGGPIY---FLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTEL: 640
                :       * * *     *  *  * ** *       *    *  *      **  * *                ***  * *         *        :
3t6q_A_1     462:-------PKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGIY-LNLASNHISIILPSLL-PILSQQRTI: 552
SecStr          :-------GGGEE SS GGGG TT  EEE TTS   EE TTTTTT TT  EEE  SS   GGGGGGGTT  S E-EE  SS      GGGH-HHHHTSSEE:    
ExpBur          :-------eebebeeebbbeebeebeebbbbebebeebeeebbeebeebeebbbbebebebebbebbeebeebe-bbbbbbebeebeeebb-ebbeebebb:    

queryA       641:DMRFNPFDCTCESIAWFVNWINETHTNIPELSSHYLCNTPPHYHGFPVRLFD-TSSC: 696
                :  * ** ****  *  *  *  *      *     **  **   *  *** * * **:
3t6q_A_1     553:NLRQNPLDCTCSNI-YFLEWYKENMQKL-EDTEDTLCENPPLLRG--VRLSDVTLSC: 605
SecStr          :E TT  EE SGGGH-HHHHHHHH GGGE-E GGG BEEESGGGTT-- BGGG     :    
ExpBur          :bbeebebbbeeebb-ebbebbeebeeeb-eebeebebeeeeeeee--eebeebeeee:

Protein Model on 3t6q_A_1_B_1 (TEMPLATE: 3t6q )

Input Residue Numbers for Focused Sites