Protein Model on 3rfj_A_1_B_1
(TEMPLATE: 
3rfj
)Protein Model on 3rfj_A_1_B_1
(TEMPLATE: 3rfj
)| CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(TLR3_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [268 aa] | Internalin B, repeat modules, Variable lymphocyte receptor :D2P9A6_LISM2:Q6E4K6_PETMA | |
| 2 | b | B 1 (A) | non-polymer(SO4) | SULFATE ION | 491A(K) (identity: 0.0 %/33.7 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:3rfj_A_1 identity=33.7% |
queryA 479:VPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIP: 578
: * * * * * * *** * * * * * * * * * * * * * * * * * *:
3rfj_A_1 62:LPNVRYLALGGNKLHDI----SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSL-----PDGVFDKLTNLTYLY---LYHNQLQSLP: 149
SecStr : TT EEE TTS ----GGGTT TT EEE TT TTTTTT TT SEEE SS ----- TTTTTT TT EEE--- SS :
ExpBur :beebeebbbbebebeeb----ebbeebeebeebbbeebebeebeeebbeebeebebbbbbebebeeb-----beebbeebeebeebb---beebebeebb:
Contact : b
queryA 579:VEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCESIAWFVNWINE: 663
: ** * * ** * * ** ** ** * * * ** ** ** ** ** * * ** :
3rfj_A_1 150:KGVFDKLTNLTRLDLDNNQLQSLPEGVFDKLTQLKQLSLNDNQLKSVPDGVFD-RLTSLTHIWLLNNPWDCACSDILYLSRWISQ: 233
SecStr :TTTTTT TT EEE SS TTTTTT TT EEE SS S TTTTT-T TT EEE SS B TTBGGGHHHHHHHHH:
ExpBur :eebbeebeebbebbbbebebeebeeebbeebeebebbbbbebebeebeebbbe-ebeebeebbbbebebebebeebebbbebbee:
|
[assembly_id:1]
[help]