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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(TLR3_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [601 aa] | Toll-like receptor 4 :TLR4_HUMAN | |
2 | b | X 1 (A) | non-polymer(MG) | MAGNESIUM ION | 301E(D) (identity: 0.0 %/31.2 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:3fxi_A_1 identity=31.2% |
queryA 37:CSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQ: 136 :* * ** ** * * * ** * * * ** * * * * * * * * * * * * : 3fxi_A_1 14:CMELNFYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLA: 113 SecStr : SS SS SS SS EEE S B TT S TT EEE TT EE TTSSTT SS EEE TT EE TTTTTT TT EEE TTS : ExpBur :beeeebeeebeebeeebeebbbbebbbeebbeebbebbeebeebebbebebeebeebbbeebeebebbbbebbebeeebebbbeebeebeebbbbebebe: queryA 137:KIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQ-LENLQELLLSNNKIQALKSEELDIFAN--SSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQL: 233 : * * * * * ** * ** * ** * ** **** * * ** * ** * * ** * * * : 3fxi_A_1 114:SLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLHKLTLRN-NF: 211 SecStr : STT TTTT TT EEE SS GGGTT TT EEE SS EE GGGGTTGGG SS EEE TT EE TTTTTT -EEEEEEEES- : ExpBur :ebeebbbbebeebeebebbebebeebebbebbeebeebeebebbebebebbeeebbebbeebeebebbbebbebebeebeeebbeeb-ebeebbbeb-bb: queryA 234:GPSLTEKLCLE-LANTSIRNLSLS----NSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLN: 328 : * * ** * * * ** *** * * * * ** * ** : 3fxi_A_1 212:DSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGL--CNLTIEEFR--------------LAYLDYYL---DDIIDLF----NCLTNV----: 284 SecStr :SSHHHHHHHHHHTTT EEEEEEEE TTS S TTTTGGG--GGSEEEEEE--------------EEEESS --- STTTS----GGGSS ----: ExpBur :eebeebeebbebbeebebebbbbbbeeeeeebeebeebbbeeb--eebebeebe--------------bbbbeeeb---eebbebb----ebbbeb----: Contact : b queryA 329:LKRSFTKQSISLASLPKIDDFS--FQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDA: 426 : ** * *** * * ** * * * * * ** * * * * : 3fxi_A_1 285:--SSFSLVSVTIE---RVKDFSYNFGW-QHLELVNCKFGQFPTLK---------------------LKSLKRLTFTS---------NKGGNAFSEVD---: 345 SecStr :--SEEEEEEEB T---T -SEEEEES B SS --------------------- SS EEEEES--------- BS SB ---: ExpBur :--bbbbbbebbbe---ebeebeeebeb-eebbbbebebeebbebe---------------------beebeebbbbe---------beeeeebeebe---: queryA 427:FSWLGHLEVLDLGLNEIG-QELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDM: 525 : * ** *** * * * ** * * * * * ** * * * **** ** * : 3fxi_A_1 346:---LPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQM-SEFSVFLSLRNLIYLDISHTHTRVAFNGI: 440 SecStr :--- TT EEE SS BEEEEEEHHHHT S EEE S SEEEEEEE-EET TT EEE TTSEEEST-BTTBTTTT TT EEE TTS B TTT: ExpBur :---beebebbbbbebebebeebbbeebbebeebeebbbbebeebebeee-bebbeebeebbbeebebeeb-eeebbbeebeebeebbbbebebebeeebb: queryA 526:LEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNN---LNTLPASVFNNQVSLKSLNLQKNLI: 622 : ** ** * * * * * * * * * * * ** * * * * ** * * *: 3fxi_A_1 441:FNGLSSLEVLKMAGNSFQENFL------PDIFTE-LRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLN---SLQVLDYSLNHI: 530 SecStr :TTT SS B TT BGGG ------ S TT- S B TTS S TTSGGG SS B TTS SS SGGGG T---T SS : ExpBur :bebbeebebbebbebbbeeeeb------bebbee-beebeebbbbebebeebbeebbebbeebeebbbbebebebbebebbeebe---ebeebbbbebeb: queryA 623:TSVEKKVFGPAFRNLTELDMRFNPFDCTCESIAWFVNWINETHTNIPELSSHYLCNTPPHYHGFPV: 688 : * * * * * **** * ** * * ** * **: 3fxi_A_1 531:MTSKKQELQHFPSSLAFLNLTQNDFACTCEHQS-FLQWIKDQRQLLVEV-ERMECATPSDKQGMPV: 594 SecStr : S TT TT S SGGGHH-HHHHHHHTTTT G-GG B S SSS SSBT: ExpBur :bebeeeebeebbeebeebbbbebebbbeeeeee-bbebbbeeeeebeee-eebebeebeeeeeeeb: |