Protein Model on 3fxi_A_1_S_1 (TEMPLATE: 3fxi )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(TLR3_HUMAN) A 1 (A) polymer(polypeptide(L)) [601 aa] Toll-like receptor 4 :TLR4_HUMAN
2 b S 1 (A) non-polymer(PO4) PHOSPHATE ION 345K(R) (identity: 0.0 %/31.2 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:3fxi_A_1 identity=31.2%
queryA        37:CSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQ: 136
                :*  *     ** **     * *  * ** *    *     *  **     *   *    * *  *  * *  *    *    *     *  *        :
3fxi_A_1      14:CMELNFYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLA: 113
SecStr          :  SS  SS   SS SS  EEE  S     B TT   S TT  EEE TT    EE TTSSTT SS  EEE TT    EE TTTTTT TT  EEE TTS   :    
ExpBur          :beeeebeeebeebeeebeebbbbebbbeebbeebbebbeebeebebbebebeebeebbbeebeebebbbbebbebeeebebbbeebeebeebbbbebebe:    

queryA       137:KIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQ-LENLQELLLSNNKIQALKSEELDIFAN--SSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQL: 233
                :   * *    * *  *   **   * **      * **  * ** ****      *            * ** *      ** *  * **  * * *   :
3fxi_A_1     114:SLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLHKLTLRN-NF: 211
SecStr          : STT TTTT TT  EEE  SS        GGGTT TT  EEE  SS   EE GGGGTTGGG SS   EEE TT    EE TTTTTT -EEEEEEEES-  :    
ExpBur          :ebeebbbbebeebeebebbebebeebebbebbeebeebeebebbebebebbeeebbebbeebeebebbbebbebebeebeeebbeeb-ebeebbbeb-bb:    

queryA       234:GPSLTEKLCLE-LANTSIRNLSLS----NSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLN: 328
                :      * *   **      * *        *         **   ***                   *  * *       *  **      * **    :
3fxi_A_1     212:DSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGL--CNLTIEEFR--------------LAYLDYYL---DDIIDLF----NCLTNV----: 284
SecStr          :SSHHHHHHHHHHTTT EEEEEEEE  TTS   S   TTTTGGG--GGSEEEEEE--------------EEEESS  ---  STTTS----GGGSS ----:    
ExpBur          :eebeebeebbebbeebebebbbbbbeeeeeebeebeebbbeeb--eebebeebe--------------bbbbeeeb---eebbebb----ebbbeb----:    

queryA       329:LKRSFTKQSISLASLPKIDDFS--FQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDA: 426
                :   **   *          ***  * *   **  *      *  *                     *  *   ** *         *   *  *      :
3fxi_A_1     285:--SSFSLVSVTIE---RVKDFSYNFGW-QHLELVNCKFGQFPTLK---------------------LKSLKRLTFTS---------NKGGNAFSEVD---: 345
SecStr          :--SEEEEEEEB T---T          -SEEEEES B SS     --------------------- SS  EEEEES--------- BS SB     ---:    
ExpBur          :--bbbbbbebbbe---ebeebeeebeb-eebbbbebebeebbebe---------------------beebeebbbbe---------beeeeebeebe---:    
Contact         :                b                                                                                   

queryA       427:FSWLGHLEVLDLGLNEIG-QELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDM: 525
                :   *  ** ***  *         *   *        ** *       * *     *  *      **   *  * *  ****  ** *           :
3fxi_A_1     346:---LPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQM-SEFSVFLSLRNLIYLDISHTHTRVAFNGI: 440
SecStr          :--- TT  EEE  SS  BEEEEEEHHHHT S   EEE  S SEEEEEEE-EET TT  EEE TTSEEEST-BTTBTTTT TT  EEE TTS   B  TTT:    
ExpBur          :---beebebbbbbebebebeebbbeebbebeebeebbbbebeebebeee-bebbeebeebbbeebebeeb-eeebbbeebeebeebbbbebebebeeebb:    

queryA       526:LEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNN---LNTLPASVFNNQVSLKSLNLQKNLI: 622
                :  **  ** *    *             *  *   *  *  * *            *  *  *       **   * * *    *   **  *    * *:
3fxi_A_1     441:FNGLSSLEVLKMAGNSFQENFL------PDIFTE-LRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLN---SLQVLDYSLNHI: 530
SecStr          :TTT SS    B TT  BGGG  ------ S  TT-  S    B TTS   S  TTSGGG SS    B TTS  SS   SGGGG T---T       SS  :    
ExpBur          :bebbeebebbebbebbbeeeeb------bebbee-beebeebbbbebebeebbeebbebbeebeebbbbebebebbebebbeebe---ebeebbbbebeb:    

queryA       623:TSVEKKVFGPAFRNLTELDMRFNPFDCTCESIAWFVNWINETHTNIPELSSHYLCNTPPHYHGFPV: 688
                :    *         *  *    * * ****    *  **        *      * **    * **:
3fxi_A_1     531:MTSKKQELQHFPSSLAFLNLTQNDFACTCEHQS-FLQWIKDQRQLLVEV-ERMECATPSDKQGMPV: 594
SecStr          :   S   TT   TT       S     SGGGHH-HHHHHHHTTTT   G-GG B  S SSS SSBT:    
ExpBur          :bebeeeebeebbeebeebbbbebebbbeeeeee-bbebbbeeeeebeee-eebebeebeeeeeeeb:

Input Residue Numbers for Focused Sites

ex) 2,15,123