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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(TLR3_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [219 aa] | Variable lymphocyte receptor diversity region | |
2 | b | B 1 (B) | branched(oligosaccharide) | alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | 538Q(H) 568N(Y) 571S 592D 595L(T) 616N(F) 618Q(C) 644F(Y) (identity: 25.0 %/39.4 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:3e6j_A_1 identity=39.4% |
queryA 533:EILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVE------: 626 : ** * * * ** * * * * ** ** ** * * *** * * ** ** * ** * * * : 3e6j_A_1 43:QILYLHDNQITKL----EPG----VFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLTELPRGIERL: 134 SecStr :SEEE SS ---- TT----TTTT TT EEE SS TTTTTT TT EEE SS TTTTTT TT EEE SS S TTGGG : ExpBur :ebbebeebebeeb----eee----ebeebeebeebbbbebebeebbebbbeebeebbbbebbebebeebeeebbeebeebeebbbbebebeebbebbeeb: Contact : b b b b b b b queryA 627:-------------KKVFGPAFRNLTELDMRF---NPFDCTCESIAWFVNWINETHTNI: 668 : * ** * * ** ** * * ** ** *: 3e6j_A_1 135:THLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECRDIMYLRNWVAD-HTSI: 191 SecStr :TT SEEE SS TTTTTT TT EEE TTS B TTBGGGHHHHHHHHH- GGG: ExpBur :eebebbbbbebebeebeebbbeebeebeebbbbebebebebeebbbbeebbee-eeeb: Contact : b bb b b |