Protein Model on 3ciy_D_1_P_1
(TEMPLATE: 
3ciy
)Protein Model on 3ciy_D_1_P_1
(TEMPLATE: 3ciy
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(TLR3_HUMAN) | D 1 (B) | polymer(polypeptide(L)) [668 aa] | Toll-like receptor 3 :TLR3_MOUSE | |
| 2 | b | P 1 (P) | branched(oligosaccharide) | alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | 363E(D) 387S 413N 437D 462Y (identity: 80.0 %/78.4 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:3ciy_D_1 identity=78.4% |
queryA 27:KCTVSHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLT: 126
: *** ********** ***** **************** ******** ** *** ********** ** ************* ** ** ******:
3ciy_D_1 1:QCTVRYNVADCSHLKLTHIPDDLPSNITVLNLTHNQLRRLPPTNFTRYSQLAILDAGFNSISKLEPELCQILPLLKVLNLQHNELSQISDQTFVFCTNLT: 100
SecStr : SSEEE S S STTS SEEE SS S TTS SS SEEE SS THHHHH SS EEE S GGGGTT SS :
ExpBur :eeeeeeeebebeeeebeebeeeeeeebebbbbbebebeebebeebeebeebeebebbebebeebeeebbeebeebebbbbeebebeeeeeebbeebeebe:
queryA 127:ELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGL: 226
:** ****** *** *** ***** *************** *********** *** ** **** **** ** **** ******** ** ** *:
3ciy_D_1 101:ELDLMSNSIHKIKSNPFKNQKNLIKLDLSHNGLSSTKLGTGVQLENLQELLLAKNKILALRSEELEFLGNSSLRKLDLSSNPLKEFSPGCFQTIGKLFAL: 200
SecStr :EEEE S S TTSS SS EEEE SS S SS SS EEE SS EE TTTSTT SS SEEE S EE TTSSTTSS EE:
ExpBur :ebbbeebebeeeeeebbeebeebeebbbbebebeebebbeeebbeebeebebbebebebbeeebbebbeebebeebbbbebebeebbebbbebbeebebb:
queryA 227:FLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRY: 326
: *** ** * ****** ** **** **** * ** ** ** ******** ******** *** ** ** * * ******* * * ** * **:
3ciy_D_1 201:LLNNAQLNPHLTEKLCWELSNTSIQNLSLANNQLLATSESTFSGLKWTNLTQLDLSYNNLHDVGNGSFSYLPSLRYLSLEYNNIQRLSPRSFYGLSNLRY: 300
SecStr :E SS HHHHHHHHHHTTTS EEE SS EE TTGGGGGGGS EEE SS EE TTTTTT TT EEE S B EE GGGGTT SS E:
ExpBur :bbeebebeeeebbebbebbbebebeebbbbebebeebeeebbbbbeebebbebbbbebebeebeebbbebbeebeebbbeebebeebeeebbebbeebee:
queryA 327:LNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDA: 426
:* *** ***** **** * ********** ** *** ** ** *** **** ******* **** *************** ****** **** :
3ciy_D_1 301:LSLKRAFTKQSVSLASHPNIDDFSFQWLKYLEYLNMDDNNIPSTKSNTFTGLVSLKYLSLSKTFTSLQTLTNETFVSLAHSPLLTLNLTKNHISKIANGT: 400
SecStr :EE TT B SSS EE SSSSTT TT EEE S TTTTTT SS EEE TT SS EE TTTTTGGGGS EEE SS EE TTT:
ExpBur :bbbebbbbeeeeeeeeebebbeebbeebeebeebbbbebbbeebeeebbeebeebeebbbbebbeebeebeeebbebbeebebeebebbebebeebeebb:
Contact : b b b
queryA 427:FSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDML: 526
:***** * ******** * * ******* *************** ********************** ***** ******************* * *:
3ciy_D_1 401:FSWLGQLRILDLGLNEIEQKLSGQEWRGLRNIFEIYLSYNKYLQLSTSSFALVPSLQRLMLRRVALKNVDISPSPFRPLRNLTILDLSNNNIANINEDLL: 500
SecStr :TTT TT EEE SS EEEE SGGGTT TT EEE S SEEEE TTTTTT TT SEEE TTS EE SSSS TTTT S EEE SS TTTT:
ExpBur :beebbebeebbbbebebebebebebbeebeebeebebbebeebbbeeebbeebeebeebbbeebebeebeeeebbbeebeebbebbbbebebeebeeebb:
Contact : b b
queryA 527:EGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVE: 626
:**** ***** ********* ***** ***************** ***** *** ***** * ******* * * * ** *************:
3ciy_D_1 501:EGLENLEILDFQHNNLARLWXXXNPGGPVNFLKGLSHLHILNLESNGLDEIPVGVFKNLFELKSINLGLNNLNKLEPFIFDDQTSLRSLNLQKNLITSVE: 600
SecStr :TT TT EEE S TT --- SS S S TT EEE SS EE TTTTTT S EEE SS EE TTS SS SS EEE TTS :
ExpBur :eebeebeebbbbebebbebb---eeeeebebbeebeebeebbbeebebeebbeebbeebeebeebbbbebebeebeeebbebbeebeebbbbebebeebe:
queryA 627:KKVFGPAFRNLTELDMRFNPFDCTCESIAWFVNWINETHTNIPELSSHYLCNTPPHYHGFPVRLFDTSSCK: 697
:* **** * ** *************** ******* ***** *** ******* ** *** ********:
3ciy_D_1 601:KDVFGPPFQNLNSLDMRFNPFDCTCESISWFVNWINQTHTNISELSTHYLCNTPHHYYGFPLKLFDTSSCK: 671
SecStr :HHHHHHHHSS SEEE TT EE STTTTHHHHHHHHH SB TTTTTTTBEEESGGGTT BTTS GGG :
ExpBur :eebbbebbeebeebbbbebebbbeeebbbebbebbeeeebebeebeeebebeeeeeeeeeebeebebeebe:
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[assembly_id:1]
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