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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(TLR3_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [663 aa] | Toll-like receptor 3 :TLR3_MOUSE | |
2 | b | G 1 (G) | branched(oligosaccharide) | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | 424S(N) 448T(S) 450Q (identity: 33.3 %/77.6 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:3cig_A_1 identity=77.6% |
queryA 27:KCTVSHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLT: 126 : *** ********** ***** **************** ******** ** *** ********** ** ************* ** ** ******: 3cig_A_1 1:QCTVRYNVADCSHLKLTHIPDDLPSNITVLNLTHNQLRRLPPTNFTRYSQLAILDAGFNSISKLEPELCQILPLLKVLNLQHNELSQISDQTFVFCTNLT: 100 SecStr : B TT B SS S SS SS S EE TTS S TTTTSTTTT SEEE SS THHHHHSTT EEE TT TTSTTS S : ExpBur :ebeeeeeebebbeeeeeebbeebeeebebbebbebebeebebeebeebeebeebebbebebeebeeebbeebeebeebbbbebebeebeeebbeebeebe: queryA 127:ELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGL: 226 :** ****** *** *** ***** *************** *********** *** ** **** **** ** **** ******** ** ** *: 3cig_A_1 101:ELDLMSNSIHKIKSNPFKNQKNLIKLDLSHNGLSSTKLGTGVQLENLQELLLAKNKILALRSEELEFLGNSSLRKLDLSSNPLKEFSPGCFQTIGKLFAL: 200 SecStr :EEE TTS S TTTT TT EEE SS SSS TT EEE SS EE SGGGGGGTT EESEEE S EE TTTTTTSSEE EE: ExpBur :ebbbebbebeeeeebbbeebeebeebbbbebbbeebebbeeebbeebeebbbbebebebbeeebbebbeebebeebbbbebebeebbeebbeebeebbbb: queryA 227:FLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRY: 326 : *** ** * ****** ** **** **** * ** ** ** ******** ******** *** ** ** * * ******* * * ** * **: 3cig_A_1 201:LLNNAQLNPHLTEKLCWELSNTSIQNLSLANNQLLATSESTFSGLKWTNLTQLDLSYNNLHDVGNGSFSYLPSLRYLSLEYNNIQRLSPRSFYGLSNLRY: 300 SecStr :E TTS HHHHHHHHHHHSSS EEE SS EE TTTTGGGTTS EEE SS EE TTTTTT TT EEE S B EE TTTTTT TT E: ExpBur :ebeebebeeebbbebbebbbebebeebbbbebebeebeeebbbbbeebebbebebbebebeebeebbbbebeebeebbbeebebeebeeebbebbeebbe: queryA 327:LNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDA: 426 :* *** ***** **** * ********** ** *** ** ** *** **** ******* **** *************** ****** **** : 3cig_A_1 301:LSLKRAFTKQSVSLASHPNIDDFSFQWLKYLEYLNMDDNNIPSTKSNTFTGLVSLKYLSLSKTFTSLQTLTNETFVSLAHSPLLTLNLTKNHISKIANGT: 400 SecStr :EE TT B SSS EE TTTTTT S EEE S B TTSSTT TT EEE TT BSS EE TTTTGGGTTS EEE SS EE TTT: ExpBur :bbbeebbbeeeeeeeeebebeeebbeebeebeebbbbebebeebeeebbeebeebeebbbbebbeebeebeeebbebbeebebeebebbebebeebeebb: Contact : b queryA 427:FSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDML: 526 :***** * ******** * * ******* *************** ********************** ***** ******************* * *: 3cig_A_1 401:FSWLGQLRILDLGLNEIEQKLSGQEWRGLRNIFEIYLSYNKYLQLSTSSFALVPSLQRLMLRRVALKNVDISPSPFRPLRNLTILDLSNNNIANINEDLL: 500 SecStr :TTT TT EEE SS EEE STTSTT SS EEE S SEEE TTTTTT TT EEE TT EES S SS TTTT TT EEE S S TTTT: ExpBur :beebbebeebbbbebebebebebebbeebeebbebebbebeebebeeebbeebeebeebbbeebebeebebeebbbeebeebbbbbbbebebeebeebbb: Contact : b b queryA 527:EGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVE: 626 :**** ***** ********* ***************** ***** *** ***** * ******* * * * ** *************: 3cig_A_1 501:EGLENLEILDFQHNNLARLWXXXXXXXXVNFLKGLSHLHILNLESNGLDEIPVGVFKNLFELKSINLGLNNLNKLEPFIFDDQTSLRSLNLQKNLITSVE: 600 SecStr :TT TT EEE SS TTT -------- S S TT EEE TTS TTTTTT TT EEE SS TTTTTT S EEE SS : ExpBur :eebeebeebbbbebebbeee--------eebbeebeebeebbbbebebeebeeebbeebeebeebbbbebebeebeeebbebbeebeebbbbebebeebe: queryA 627:KKVFGPAFRNLTELDMRFNPFDCTCESIAWFVNWINETHTNIPELSSHYLCNTPPHYHGFPVRLFDTSSCK: 697 :* **** * ** *************** ******* ***** *** ******* ** *** ********: 3cig_A_1 601:KDVFGPPFQNLNSLDMRFNPFDCTCESISWFVNWINQTHTNISELSTHYLCNTPHHYYGFPLKLFDTSSCK: 671 SecStr :HHHHHHHHTS SEEE S EE SHHHHHHHHHHHHH EETTHHHH BEEESGGGTT BGGG SS : ExpBur :eebbbbbbeebeebbbbebebbbeeebbeebbebbeeeebebeeeeeebebeeeeeeeeeebeebeeeeee: |