Protein Model on 2z64_A_1_E_1 (TEMPLATE: 2z64 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(TLR3_HUMAN) A 1 (A) polymer(polypeptide(L)) [599 aa] Toll-like receptor 4 :TLR4_MOUSE
2 b E 1 (E) branched(oligosaccharide) beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose 224F(H) 252N(R) (identity: 0.0 %/27.9 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:2z64_A_1 identity=27.9%
queryA        37:CSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQ: 136
                :*   **  **** *       *  * *  *    *   * *  **     *   *      *  *  * *  *     *   *   * *  *        :
2z64_A_1      13:CMDQKLSKVPDDIPSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLA: 112
SecStr          : SSS  SS  SSS SS  EEE  SS   EE TTTTSS TT  EEE SS    EE TTTTTT TT  EEE TT       TTTTTT TT  EEE TTS   :    
ExpBur          :beeeeeeebbeebeeebeebbbbebebeebeeeebeebeebeebbbeebebeebeeebbebbeebbebbbebbebeebeeebbeebeebeebbbbebebe:    

queryA       137:KIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQ-LENLQELLLSNNKIQALKSEELDIFANSSLK--KLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQL: 233
                :     *      *  *   **   * **      * **    ** * **      *            *  * * *       *  *  *  * *     :
2z64_A_1     113:SLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGI-KLHELTLRG-NF: 210
SecStr          : TTT   TT TT  EEE  SS        GGGGT TT  EEE TTS   EE TTTTTTTTT TT   EEE TT    EE TTTTTTE-EEEEEEEES-  :    
ExpBur          :ebeebebeebeebeebebbebebeebbbbebbeebeebeebbbbebebeebeeebbebbeebeeeebbbbbbbbebeebeeebbeeb-ebebbbbeb-bb:    
Contact         :                                                                 b                        b         

queryA       234:GPSLTEKLCLE-LANTSIRNLSLS----NSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYL-: 327
                :  *   * **  **      * *        *         **         * * *                               ** *     ** :
2z64_A_1     211:NSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTN-------------DFSDDIVKFHCLANVSAMSLAGV-SIKYLE: 296
SecStr          :SSHHHHHHHHHHT SEEEEEEEEE  TTSS  S   GGGGTTTTTSEEEEEEE   S-------------S  TTGGG GGGTT SEEEEES -      :    
ExpBur          :eebeebeebbebbeebebebbbbbbeeeeeebeebebebbebbeebebebbebbbbe-------------ebbeebbebebbbebebbbbebb-ebeebe:    
Contact         :                   b                                                                                

queryA       328:NLKRSFTKQSISL--ASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESD: 425
                :     *  ** *     *          ** *  * *    *   *      *  * ** **    *           *    *  * *  *    * * :
2z64_A_1     297:DVPKHFKWQSLSIIRCQLKQFPTLDLPFLKSLT-LTMNKGSISFKK----VALPSLSYLDLSRNALSFSGCC--SYSDLGTNSLRHLDLSFNG-AIIMSA: 388
SecStr          :   TT   SEEEEES   SS      TT  EEE-EESBSS  B   ----   TT  EEE  SBS BEEEE --SHHHHS S   EEE  S S-EEEE S:    
ExpBur          :ebeeebebeebbbeebebeebbebebeebeebb-bbebeeebebee----bebeebeebbbbebebebeebb--beebbbbeebebbbbbebe-ebebee:    

queryA       426:AFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDM: 525
                : *  *  *  **                 **       **          *    **  *       *        *    *** ****      *    :
2z64_A_1     389:NFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKD-NTLSNVFANTTNLTFLDLSKCQLEQISWGV: 487
SecStr          :  TT TT  EEE TTSEEESTTTS TTTT TT  EEE TTS  EE  S TTTT TT  EEE TT EEGG-GEE STTSS TT SEEE TT    EE TTT:    
ExpBur          :ebebbeebeebbbeebebeebbeebbbeebeebebbbbbebebebeeebbbeebeebeebebbebebee-eebbebbeebeebbebbbbebebeebeeeb:    

queryA       526:LEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSV: 625
                :   *  *  *   ****                        * * *             *  *   *   *   *                  *      :
2z64_A_1     488:FDTLHRLQLLNMSHNNL------------------------LFLDSSHYNQ--------LYSLSTLDCSFNRIET-----------------SKGILQHF: 538
SecStr          :TTT TT  EEE  SS  ------------------------ EEEGGGTTT-------- TT  EEE  SS   E-----------------EES GGGS:    
ExpBur          :beebeebeebbbbebeb------------------------eebebebbee--------beebeebbbbebebeb-----------------beeebeeb:    

queryA       626:EKKVFGPAFRNLTELDMRFNPFDCTCESIAWFVNWINETH---TNIPELSSHYLCNTPPHYHGFPVRLFDTSSC: 696
                : *     ** ***      *   * **    *  *  *      *         * **       *  *  * *:
2z64_A_1     539:PKSL---AFFNLTN-----NSVACICEH-QKFLQWVKEQKQFLVNVEQMT----CATPVEMNTSLVLDFNNSTC: 599
SecStr          : TT --- EEE  S-----  B  SGGG-HHHHHHHHHTGGGBTTGGG B----B SSS SS BGGG  S TT :    
ExpBur          :beeb---eebebbe-----eebbbeeeb-eebbebbeeeeeebeebeebe----beeeeeeeeebeeeeeeeee:

Input Residue Numbers for Focused Sites

ex) 2,15,123