[pdbjlvh2]Protein Model on 2id5_A_1_G

Protein Model on 2id5_A_1_G_1 (TEMPLATE: 2id5 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(TLR3_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [470 aa]	Leucine rich repeat neuronal 6A :Q96FE5_HUMAN
2	b		G 1 (G)	branched(oligosaccharide)	2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose	235P 259Q(Y) 285N (identity: 66.7 %/26.1 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:2id5_A_1 identity=26.1%

queryA        27:KCTVSHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLT: 126
                : *        *       **   **    * *  *    *    *     *  *    *  *  **     *  *  * *  * *       *    ***:
2id5_A_1       8:ECSAQDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLT: 107
SecStr          :EEETTTTEEE  S   SS  S   TT SEEE  SS   EE TTTTTT TT  EEE TTS   EE TTTTTT TT  EEE  SS   S  TTSSTT TT  :    
ExpBur          :eeeeeeebbebeeeebeebbeebbeebeebbbbebebeebeeeebeebeebeebbbbebebeebeebbbeebeebebbbbebbebeebeeebbeebeebb:    

queryA       127:ELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLE-LSSNQIKEFSPGCFHAIGRLFG: 225
                : *    * *       *    **  *    * *          *  *  * *          * *          *  *  * *   *        **  :
2id5_A_1     108:KLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYS------FKRLYR: 201
SecStr          :EEE TTS   EE TTTTTT TT  EEEE  TT  EE TTSSTT TT  EEEEES   SS  HHHHTT TT  EEEEES    EE TT ------S S TT:    
ExpBur          :ebbbbebebeebeeebbeebeebebbebbbeebeebbeebbbbbeebeebbbbebebeebbeebbbebeebebbebeebebebbeeeb------beebee:    

queryA       226:LFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVR: 325
                :*        *                        * *       **   *** *     **  *       *  *    * ** *       ** *    :
2id5_A_1     202:LKVLEISHWP-----------------------YLDTMTPNCLYGL---NLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQ: 275
SecStr          :  EEEEE  T-----------------------T  EE TTTTTT ---  SEEEEESS   S  HHHHTT TT  EEE  SS   EE TTS TT TT  :    
ExpBur          :beebbbbebe-----------------------ebeebbeebbeeb---ebbebbbbebebeebbbebbeebeebeebebbebebeebeeeebeebeebe:    
Contact         :         b                       b                         b                                        

queryA       326:YLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNS: 389
                :   *             *       *  *  *  **   *         *    **  * *   :
2id5_A_1     276:EIQLVG---------GQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSN: 330
SecStr          :EEE  S---------S  SEE TTTBTT TT  EEE  SS  S   GGGBS GGG  EEE  SS:    
ExpBur          :ebbbbe---------bebeebeeebbebbeebebbbbbebebebbeeebbeebeebebbbbbeb:

Protein Model on 2id5_A_1_G_1 (TEMPLATE: 2id5 )

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