[pdbjlvh2]Protein Model on 1xcd_A_1_F

Protein Model on 1xcd_A_1_F_1 (TEMPLATE: 1xcd )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(TLR3_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [305 aa]	Decorin :PGS2_BOVIN
2	b		F 1 (A)	non-polymer(TRS)	2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL	32H(L) 33E(R) 34V 54T(A) 78T(H) (identity: 20.0 %/32.0 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:1xcd_A_1 identity=32.0%

queryA        27:KCTVSHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLT: 126
                : *     *  ** * *  ** ***     * *  *         *     *  *    * ***  *     *  *  * *  * *  *  *       * :
1xcd_A_1      28:RCQCHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKELPEK---MPKTLQ: 124
SecStr          :T EE SSEEE TTS  SS   S  TT  EEE  SS   EE TTTTTT TT  EEE  SS   EE TTTTTT TT  EEE  SS  SB  SS---  TT  :    
ExpBur          :ebeeeeeebebbebebeebbeebbeebbebbbeebebeebeeebbeebeebebbbbeebebeebeebbbeebeebeebbbbebebeebbbe---bbeebe:    
Contact         :     bbb                   b                       b                                                

queryA       127:ELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGL: 226
                :**    * * *     *      *   *  * * *                  *   *  *           *         *     *           :
1xcd_A_1     125:ELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSG--------------IENGAFQGMK----------KLSYIRIADTNITTIPQG-----------: 189
SecStr          :EEE  SS   BB GGGGTT TT  EEE  S    GGG--------------B TTTTTT T----------T  EEE  SS   S  SS-----------:    
ExpBur          :bbebeebebeebeeebbeebeebeebbbbebebeeeb--------------beebbbebbe----------ebeebbbbebebeebbee-----------:    

queryA       227:FLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNI: 310
                :      * *****             * *              **   **  * ** *    * * * *  * *    *  *  :
1xcd_A_1     190:------LPPSLTE-------------LHLDGNKITKVDAASLKGL--NNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKL: 252
SecStr          :------  TT SE-------------EE TTS   EE TTTTTT --TT  EEE  SS   EE TTTGGGSTT  EEE  SS  :    
ExpBur          :------bbeebee-------------bbbeebebeebbeebbeeb--eebbebbbbebebeebeeebbeebeebeebebbebeb:

Protein Model on 1xcd_A_1_F_1 (TEMPLATE: 1xcd )

Input Residue Numbers for Focused Sites